RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 E9PBE3 544 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 M0QZQ0 153 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 KLHL41O60662 606 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 C2P06681 752 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 SPRP35270 261 aaPredicted RBP14.1□□□□□ -0.15
TRIM4-201ENST00000349062 MAGEA3P43357 314 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 SLC1A6P48664 564 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 SEMA3BQ13214 749 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 KPNB1Q14974 876 aaKnown RBP14.1□□□□□ -0.15
TRIM4-201ENST00000349062 PM20D1Q6GTS8 502 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 NAPEPLDQ6IQ20 393 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 ISLR2Q6UXK2 745 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 C4orf22Q6V702 233 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 CCDC124Q96CT7 223 aaKnown RBP14.1□□□□□ -0.15
TRIM4-201ENST00000349062 IGSF9Q9P2J2 1179 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 SCOCQ9UIL1 159 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 PCDHB8Q9UN66 801 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 RUVBL2Q9Y230 463 aaKnown RBP14.1□□□□□ -0.15
TRIM4-201ENST00000349062 CRYL1Q9Y2S2 319 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 B2RBV5 119 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 TLR5O60602 858 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 SLC12A2P55011 1212 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 GALNT3Q14435 633 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 TRIM71Q2Q1W2 868 aaKnown RBP14.1□□□□□ -0.15
TRIM4-201ENST00000349062 EGFL6Q8IUX8 553 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 LGI2Q8N0V4 545 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 PPFIBP2Q8ND30 876 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 HDAC11Q96DB2 347 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 GLOD4Q9HC38 313 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 PRDM5Q9NQX1 630 aaPredicted RBP14.1□□□□□ -0.15
TRIM4-201ENST00000349062 RGS18Q9NS28 235 aa14.1□□□□□ -0.15
TRIM4-201ENST00000349062 A0A1B0GVG6 124 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 ENPP3O14638 875 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 T-ENOLP0DO92 83 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 RALBP11234 206 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 CPA3P15088 417 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 WNT3AP56704 352 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 COG7P83436 770 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 FBXL22Q6P050 247 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 FUT10Q6P4F1 479 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 SH2D5Q6ZV89 423 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 ARHGAP12Q8IWW6 846 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 ZNF296Q8WUU4 475 aaPredicted RBP14.09□□□□□ -0.15
TRIM4-201ENST00000349062 SCG3Q8WXD2 468 aaKnown RBP14.09□□□□□ -0.15
TRIM4-201ENST00000349062 TTC1Q99614 292 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 NMRK1Q9NWW6 199 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 MTF2Q9Y483 593 aaPredicted RBP14.09□□□□□ -0.15
TRIM4-201ENST00000349062 NEMP2A6NFY4 417 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 KCNU1A8MYU2 1149 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 RPS24P62847 133 aaKnown RBP14.09□□□□□ -0.15
TRIM4-201ENST00000349062 CDK16Q00536 496 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 NFE2Q16621 373 aaPredicted RBP14.09□□□□□ -0.15
TRIM4-201ENST00000349062 TCTN1Q2MV58 587 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 MON1AQ86VX9 555 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 CCNJLQ8IV13 435 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 DENND1CQ8IV53 801 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 SERPINB11Q96P15 392 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 PNPLA8Q9NP80 782 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.09□□□□□ -0.15
TRIM4-201ENST00000349062 A0A0D9SEW6 157 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 DLDP09622 509 aaKnown RBP14.09□□□□□ -0.15
TRIM4-201ENST00000349062 SKIP12755 728 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 ATP6V1C1P21283 382 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 ALDH7A1P49419 539 aaKnown RBP14.09□□□□□ -0.15
TRIM4-201ENST00000349062 EPHB1P54762 984 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 MRPS35P82673 323 aaKnown RBP14.09□□□□□ -0.15
TRIM4-201ENST00000349062 PTPRRQ15256 657 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 ZNF789Q5FWF6 425 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 TEDDM1Q5T9Z0 273 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 MARC1Q5VT66 337 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRIM4-201ENST00000349062 OR7D4Q8NG98 312 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 GBP5Q96PP8 586 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 KCNK13Q9HB14 408 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 STOML1Q9UBI4 398 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 EMCNQ9ULC0 261 aa14.09□□□□□ -0.15
TRIM4-201ENST00000349062 ZCWPW2A0A1B0GU75 182 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 TNFRSF10BO14763 440 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 NCAM2O15394 837 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 PLIN3O60664 434 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 MAFKO60675 156 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 CHRNGP07510 517 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 SELPP16109 830 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 RINLQ6ZS11 566 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 MTBPQ96DY7 904 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 FAM161BQ96MY7 647 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 ATP11BQ9Y2G3 1177 aa14.08□□□□□ -0.15
TRIM4-201ENST00000349062 PRR5-ARHGAP8B1AHC4 643 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 GLRA3O75311 464 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 GJB5O95377 273 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 CRHR1P34998 444 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 ARHGAP8P85298 464 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 NIPAL4Q0D2K0 466 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 CSHL1Q14406 222 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 MS4A13Q5J8X5 152 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 SPANXN3Q5MJ09 141 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 LINGO4Q6UY18 593 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 WDR75Q8IWA0 830 aaKnown RBP14.08□□□□□ -0.16
TRIM4-201ENST00000349062 SNX31Q8N9S9 440 aa14.08□□□□□ -0.16
TRIM4-201ENST00000349062 SLC7A6OSQ96CW6 309 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms