RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CCL26Q9Y258 94 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 CBX4O00257 560 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 TCF3P15923 654 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 ADRA1AP35348 466 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 CD86P42081 329 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 MAXP61244 160 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 CRADDP78560 199 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 SPANXN3Q5MJ09 141 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 CYS1Q717R9 158 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 DHRS4Q9BTZ2 278 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 TBK1Q9UHD2 729 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 CEBPBP17676 345 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 WNT3AP56704 352 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 SKOR1P84550 965 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 DSC2Q02487 901 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 NIPAL4Q0D2K0 466 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 EFTUD2Q15029 972 aaKnown RBP eCLIP18.95■□□□□ 0.62
PTN-201ENST00000348225 KBTBD12Q3ZCT8 623 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 KDELC1Q6UW63 502 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 PRPF39Q86UA1 669 aaKnown RBP18.95■□□□□ 0.62
PTN-201ENST00000348225 PGBD5Q8N414 524 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 MRGPRX2Q96LB1 330 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 PSKH2Q96QS6 385 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 CNOT10Q9H9A5 744 aaKnown RBP18.95■□□□□ 0.62
PTN-201ENST00000348225 PLAC1Q9HBJ0 212 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 TBC1D14Q9P2M4 693 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 VPS28Q9UK41 221 aa18.95■□□□□ 0.62
PTN-201ENST00000348225 INHBAP08476 426 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 CSKP41240 450 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 USP4Q13107 963 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 CRYMQ14894 314 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 ZNF77Q15935 545 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 FSCBQ5H9T9 825 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 ARMC3Q5W041 872 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 ALG1LQ6GMV1 187 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 ADGRD1Q6QNK2 874 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 TMC5Q6UXY8 1006 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 TPGS1Q6ZTW0 290 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 LRRC6Q86X45 466 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 DCAF4L2Q8NA75 395 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 ARRDC2Q8TBH0 407 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 SLC44A1Q8WWI5 657 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 BHMTQ93088 406 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 MRPL38Q96DV4 380 aaKnown RBP18.94■□□□□ 0.62
PTN-201ENST00000348225 MRRFQ96E11 262 aaKnown RBP18.94■□□□□ 0.62
PTN-201ENST00000348225 SEMA3CQ99985 751 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 MGME1Q9BQP7 344 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 FEM1AQ9BSK4 669 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 KIF9Q9HAQ2 790 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 ACTL7BQ9Y614 415 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 MIA3Q5JRA6 1907 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 CEP290O15078 2479 aa18.94■□□□□ 0.62
PTN-201ENST00000348225 EPOPA6NHQ4 379 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 A6NNZ2 444 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 ATP9BO43861 1147 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 USP1O94782 785 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 ALDH1A2O94788 518 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 PRAMEF12O95522 483 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 MMP2P08253 660 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 GLDCP23378 1020 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 MZF1P28698 734 aaPredicted RBP18.93■□□□□ 0.62
PTN-201ENST00000348225 ATP1A2P50993 1020 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 SLC14A2Q15849 920 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 PCSK7Q16549 785 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 TUBB8Q3ZCM7 444 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 CERCAMQ5T4B2 595 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 RNF43Q68DV7 783 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 ZNF449Q6P9G9 518 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 RANBP10Q6VN20 620 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 EXOC3L1Q86VI1 746 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 CTAGE3PQ8IX95 158 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 C12orf76Q8N812 135 aaPredicted RBP18.93■□□□□ 0.62
PTN-201ENST00000348225 ZNF557Q8N988 423 aaPredicted RBP18.93■□□□□ 0.62
PTN-201ENST00000348225 ING5Q8WYH8 240 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 CDKL2Q92772 493 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 TTC17Q96AE7 1141 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 TADA1Q96BN2 335 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 C2orf49Q9BVC5 232 aaPredicted RBP18.93■□□□□ 0.62
PTN-201ENST00000348225 MOCS1Q9NZB8 636 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 SENP1Q9P0U3 644 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 KIAA1522Q9P206 1035 aaPredicted RBP18.93■□□□□ 0.62
PTN-201ENST00000348225 SOX13Q9UN79 622 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 OR51B4Q9Y5P0 310 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 RPS6KL1Q9Y6S9 549 aa18.93■□□□□ 0.62
PTN-201ENST00000348225 NUP210Q8TEM1 1887 aaPredicted RBP18.93■□□□□ 0.62
PTN-201ENST00000348225 FAM237BA0A1B0GVD1 139 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 FAM159BA6NKW6 160 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 SERPINF2P08697 491 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 KRT15P19012 456 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 CES1P23141 567 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 BMP8BP34820 402 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 NUMBP49757 651 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 ARF5P84085 180 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 NAB1Q13506 487 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 KCNC3Q14003 757 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 FRG1Q14331 258 aaKnown RBP18.92■□□□□ 0.62
PTN-201ENST00000348225 POTEHQ6S545 545 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 SLC26A11Q86WA9 606 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 CYP4X1Q8N118 509 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 PPM1NQ8N819 430 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms