RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 RWDD4Q6NW29 188 aaKnown RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 NET1Q7Z628 596 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 PTAR1Q7Z6K3 402 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 ZNF280BQ86YH2 543 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 KLHL5Q96PQ7 755 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CPNE1Q99829 537 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 FRMD8Q9BZ67 464 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 MMADHCQ9H3L0 296 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-201ENST00000347613 ZNF385DQ9H6B1 395 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 NMRAL1Q9HBL8 299 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 CSNK1G1Q9HCP0 422 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 S100A14Q9HCY8 104 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 ASB3Q9Y575 518 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 PCDHB12Q9Y5F1 795 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 PTGDR2Q9Y5Y4 395 aa6.14□□□□□ -1.43
CLCN3-201ENST00000347613 LRRC14BA6NHZ5 514 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 CACNG3O60359 315 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 FBXO21O94952 628 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 HAPLN1P10915 354 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 COX4I1P13073 169 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 ADRA1AP35348 466 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 SLC1A2P43004 574 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 MTA1Q13330 715 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 CEACAM7Q14002 265 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 FAM110CQ1W6H9 321 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 FBXO48Q5FWF7 155 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 STXBP5Q5T5C0 1151 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 GRTP1Q5TC63 336 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 FAM171BQ6P995 826 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 RTN4RL1Q86UN2 441 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 CIR1Q86X95 450 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 TDRD5Q8NAT2 981 aaKnown RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 TXNDC5Q8NBS9 432 aaKnown RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 CFAP61Q8NHU2 1237 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 PPP1R14CQ8TAE6 165 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 NAT14Q8WUY8 206 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 HDAC11Q96DB2 347 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 TNIP3Q96KP6 325 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 MRGPRX2Q96LB1 330 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 C1orf21Q9H246 121 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 RCOR3Q9P2K3 495 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 GIMAP2Q9UG22 337 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 SOX13Q9UN79 622 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 RUVBL2Q9Y230 463 aaKnown RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 C17orf102A2RUQ5 167 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 MATN2O00339 956 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 TNFRSF10BO14763 440 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 PMPCBO75439 489 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 PIGNO95427 931 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 MT-CO1P00395 513 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 MMP2P08253 660 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 XRCC1P18887 633 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 ARSDP51689 593 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 PLK1P53350 603 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 C1QTNF8P60827 252 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 MXRA7P84157 204 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 MAP2K5Q13163 448 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 CUL3Q13618 768 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 CCDC6Q16204 474 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 PLA2G4EQ3MJ16 856 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 SPANXN3Q5MJ09 141 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 LGSNQ5TDP6 509 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 PGBD5Q8N414 524 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 IPMKQ8NFU5 416 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 KLHL32Q96NJ5 620 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 CATSPER2Q96P56 530 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 NPAS2Q99743 824 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 ECSITQ9BQ95 431 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 TRIM8Q9BZR9 551 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 LRRC40Q9H9A6 602 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 DNAJC28Q9NX36 388 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 UBAP1Q9NZ09 502 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 GABRQQ9UN88 632 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 NOD1Q9Y239 953 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 SF3B1O75533 1304 aaKnown RBP eCLIP6.13□□□□□ -1.439e-6■■■■■ 68.9
CLCN3-201ENST00000347613 AIM2O14862 343 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 PAGE1O75459 146 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 DDHD2O94830 711 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 OR6B1O95007 311 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 CELF2O95319 508 aaKnown RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 MOCS2O96007 188 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 TFEBP19484 476 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 CRABP2P29373 138 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 GRK4P32298 578 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 THOP1P52888 689 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 TAS2R39P59534 338 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 MGAT3Q09327 533 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 MPP3Q13368 585 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 PCSK7Q16549 785 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 FSCN1Q16658 493 aaKnown RBP6.13□□□□□ -1.43
CLCN3-201ENST00000347613 ALFQ53S48 1182 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 C1QTNF12Q5T7M4 302 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 PIK3R6Q5UE93 754 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 PIM3Q86V86 326 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 TTC39CQ8N584 583 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 OR52K2Q8NGK3 314 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 GRIN3AQ8TCU5 1115 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 ACMSDQ8TDX5 336 aa6.13□□□□□ -1.43
CLCN3-201ENST00000347613 SLC26A7Q8TE54 656 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms