RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TDRPQ86YL5 185 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 CCNJLQ8IV13 435 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 DEFB123Q8N688 67 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 CELF5Q8N6W0 485 aaKnown RBP11.16□□□□□ -0.62
ECM1-201ENST00000346569 ING5Q8WYH8 240 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 IRF7Q92985 503 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 ATP6V1G3Q96LB4 118 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 PSKH2Q96QS6 385 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 CCDC77Q9BR77 488 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 VPS37BQ9H9H4 285 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 KIF9Q9HAQ2 790 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 ATP13A1Q9HD20 1204 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 SPHK2Q9NRA0 654 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 VPS45Q9NRW7 570 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 GOLGA6AQ9NYA3 693 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 LMCD1Q9NZU5 365 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 FETUBQ9UGM5 382 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 ACTL7AQ9Y615 435 aa11.16□□□□□ -0.62
ECM1-201ENST00000346569 MYO9BQ13459 2157 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 CXorf51AA0A1B0GTR3 108 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 LOC285095A0A1B0GVY8 99 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 TLDC2A0PJX2 215 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 MAGEB16A2A368 324 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 AP3B1O00203 1094 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 SNAP91O60641 907 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 CR2P20023 1033 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 MGAT1P26572 445 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 PHBP35232 272 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 CSKP41240 450 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 SESN2P58004 480 aaPredicted RBP11.15□□□□□ -0.62
ECM1-201ENST00000346569 MAXP61244 160 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 ARF5P84085 180 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 SKOR1P84550 965 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 CDH17Q12864 832 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 MSLNQ13421 630 aaPredicted RBP11.15□□□□□ -0.62
ECM1-201ENST00000346569 SLC12A1Q13621 1099 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 LONRF1Q17RB8 773 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 NAPEPLDQ6IQ20 393 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 UNC5AQ6ZN44 842 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 MFN1Q8IWA4 741 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 CCDC117Q8IWD4 279 aaPredicted RBP11.15□□□□□ -0.62
ECM1-201ENST00000346569 NPAS3Q8IXF0 933 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 APCDD1Q8J025 514 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 GOLGA6L1Q8N7Z2 621 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 TTC16Q8NEE8 873 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 EPS8L3Q8TE67 593 aaKnown RBP11.15□□□□□ -0.62
ECM1-201ENST00000346569 FBF1Q8TES7 1133 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 TLCD1Q96CP7 247 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 RSPRY1Q96DX4 576 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 NSMCE3Q96MG7 304 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 MGME1Q9BQP7 344 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 NAT9Q9BTE0 207 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 MUC3BQ9H195 1237 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 S1PR5Q9H228 398 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 ZNF576Q9H609 170 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 ACSS3Q9H6R3 686 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 TRPV4Q9HBA0 871 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 PLK2Q9NYY3 685 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 MOCS1Q9NZB8 636 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 BFARQ9NZS9 450 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 KIAA1522Q9P206 1035 aaPredicted RBP11.15□□□□□ -0.62
ECM1-201ENST00000346569 UBA2Q9UBT2 640 aaPredicted RBP11.15□□□□□ -0.62
ECM1-201ENST00000346569 ZC3H7BQ9UGR2 993 aaKnown RBP11.15□□□□□ -0.62
ECM1-201ENST00000346569 SEPT3Q9UH03 358 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 LGALS13Q9UHV8 139 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 FBXO10Q9UK96 956 aa11.15□□□□□ -0.62
ECM1-201ENST00000346569 INTS6Q9UL03 887 aaKnown RBP11.15□□□□□ -0.62
ECM1-201ENST00000346569 TRANK1O15050 2925 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 TCRBV9S1A1TA0A576 114 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 HMGB1P1B2RPK0 211 aaPredicted RBP11.14□□□□□ -0.63
ECM1-201ENST00000346569 CBX4O00257 560 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 NEBLO76041 1014 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 ALDH1A2O94788 518 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 CYBBP04839 570 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 HOXB8P17481 243 aaPredicted RBP11.14□□□□□ -0.63
ECM1-201ENST00000346569 CES1P23141 567 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 FSHRP23945 695 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 PRKCHP24723 683 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 WNT3AP56704 352 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 DSC2Q02487 901 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 ITKQ08881 620 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 NSUN2Q08J23 767 aaKnown RBP eCLIP11.14□□□□□ -0.63
ECM1-201ENST00000346569 LMAN2Q12907 356 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 SLC14A2Q15849 920 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 CERCAMQ5T4B2 595 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
ECM1-201ENST00000346569 KIAA0907Q7Z7F0 614 aaPredicted RBP11.14□□□□□ -0.63
ECM1-201ENST00000346569 TMEM135Q86UB9 458 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.14□□□□□ -0.63
ECM1-201ENST00000346569 DCAF4L2Q8NA75 395 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 FGF13Q92913 245 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 ACDQ96AP0 544 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 STAMBPL1Q96FJ0 436 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 ASB16Q96NS5 453 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 XPO6Q96QU8 1125 aaKnown RBP11.14□□□□□ -0.63
ECM1-201ENST00000346569 TBL1YQ9BQ87 522 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 APOL2Q9BQE5 337 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 DHRS4Q9BTZ2 278 aa11.14□□□□□ -0.63
ECM1-201ENST00000346569 POLR1EQ9GZS1 481 aaKnown RBP11.14□□□□□ -0.63
ECM1-201ENST00000346569 PPCSQ9HAB8 311 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms