RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TM6SF2Q9BZW4 377 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 ZDHHC6Q9H6R6 413 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 PREBQ9HCU5 417 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 AASDHPPTQ9NRN7 309 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 NEU3Q9UQ49 428 aa16.06■□□□□ 0.16
TSPAN4-201ENST00000346501 TNRC6BQ9UPQ9 1833 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 CFAP54Q96N23 3096 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 CDX4O14627 284 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 PLRG1O43660 514 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 MAGEC1O60732 1142 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 LEFTY1O75610 366 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 GSRP00390 522 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 DRD3P35462 400 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 NEK3P51956 506 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 CNTN1Q12860 1018 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 GRIK2Q13002 908 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 SERINC3Q13530 473 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 KRT81Q14533 505 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 SETMARQ53H47 684 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 NEK5Q6P3R8 708 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 ERN2Q76MJ5 926 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 ARHGEF26Q96DR7 871 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 HMCESQ96FZ2 354 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 PEBP4Q96S96 227 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 KCTD15Q96SI1 283 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 OSBPL1AQ9BXW6 950 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 NHEJ1Q9H9Q4 299 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 SP110Q9HB58 689 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 TM9SF3Q9HD45 589 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 LUC7LQ9NQ29 371 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 UBA2Q9UBT2 640 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 SARDHQ9UL12 918 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 DMTF1Q9Y222 760 aa16.05■□□□□ 0.16
TSPAN4-201ENST00000346501 KRIT1O00522 736 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 DFNA5O60443 496 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 TMCC1O94876 653 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 PCDH8O95206 1070 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 TMEM253P0C7T8 217 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 ERCC2P18074 760 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 SERPINB6P35237 376 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 CSNK1EP49674 416 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 SLC14A1Q13336 389 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 HNRNPDQ14103 355 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 GRM3Q14832 879 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 SUZ12Q15022 739 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 DPYSL2Q16555 572 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 CA9Q16790 459 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 SMTNL2Q2TAL5 461 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 ARTNQ5T4W7 220 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 TMCO3Q6UWJ1 677 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 MAP7D3Q8IWC1 876 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 RHOT2Q8IXI1 618 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 ARFGAP1Q8N6T3 406 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 PAF1Q8N7H5 531 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 CHST14Q8NCH0 376 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 NSMCE1Q8WV22 266 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 SERAC1Q96JX3 654 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 HDAC8Q9BY41 377 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 NUMA1Q14980 2115 aa16.04■□□□□ 0.16
TSPAN4-201ENST00000346501 A0A1B0GVT2 93 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 DFFAO00273 331 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 NEMP1O14524 444 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 IGHV4-34P06331 123 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 CTSLP07711 333 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 CSRP1P21291 193 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 XPAP23025 273 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 ITGB7P26010 798 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 NOVA1P51513 510 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 STAT4Q14765 748 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 MYLK3Q32MK0 819 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 ODF2Q5BJF6 829 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 KCNT1Q5JUK3 1230 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 CFAP58Q5T655 872 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 AGBL4Q5VU57 503 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 LEKR1Q6ZMV7 388 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 ZSCAN30Q86W11 494 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 TRIM69Q86WT6 500 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 BBS5Q8N3I7 341 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 RAB7BQ96AH8 199 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 CELF6Q96J87 481 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 FEM1CQ96JP0 617 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 BTBD6Q96KE9 485 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 GAREM1Q9H706 876 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 FSCN3Q9NQT6 498 aa16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 DNAAF2Q9NVR5 837 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 CWC15Q9P013 229 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-201ENST00000346501 PLK4O00444 970 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 PROSCO94903 275 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 IPO7O95373 1038 aaKnown RBP16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 KRT7P08729 469 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 RARAP10276 462 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 CEACAM1P13688 526 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 CD38P28907 300 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 PAPOLAP51003 745 aaKnown RBP16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 CDH6P55285 790 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 RFTN1Q14699 578 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 ZNF805Q5CZA5 627 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 TMCO4Q5TGY1 634 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 NAPEPLDQ6IQ20 393 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms