RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 IFT43Q96FT9 208 aa15.16■□□□□ 0.02
CTTN-202ENST00000346329 UTP6Q9NYH9 597 aaKnown RBP15.16■□□□□ 0.02
CTTN-202ENST00000346329 KRT87PA6NCN2 255 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 NEMP1O14524 444 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 HOXA2O43364 376 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 PTPN7P35236 360 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 RPL34P49207 117 aaKnown RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 SARNPP82979 210 aaKnown RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 FPGSQ05932 587 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 TNK2Q07912 1038 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 PPIDQ08752 370 aaKnown RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 MRPL58Q14197 206 aaKnown RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 TMA16Q96EY4 203 aaKnown RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 BTN2A3PQ96KV6 586 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 TBATAQ96M53 351 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 CIPCQ9C0C6 399 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 MAN1C1Q9NR34 630 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 FAM50BQ9Y247 325 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 HMX2A2RU54 273 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 IQCF5A8MTL0 148 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 PLK4O00444 970 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 ACSL4O60488 711 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 OPHN1O60890 802 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 TUFMP49411 452 aaKnown RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 EPHB1P54762 984 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 ZNF177Q13360 481 aaPredicted RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 PAFAH1B3Q15102 231 aaKnown RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 RBM20Q5T481 1227 aaKnown RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 KCNMB4Q86W47 210 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 CCNYL1Q8N7R7 359 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 GSDMBQ8TAX9 411 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 HDAC10Q969S8 669 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 C8orf48Q96LL4 319 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 TMEM237Q96Q45 408 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 TBL1YQ9BQ87 522 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 FAM129AQ9BZQ8 928 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 EVLQ9UI08 416 aaPredicted RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 CD84Q9UIB8 345 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 EFR3BQ9Y2G0 817 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 RRP15Q9Y3B9 282 aaKnown RBP15.15■□□□□ 0.02
CTTN-202ENST00000346329 PCDHB9Q9Y5E1 797 aa15.15■□□□□ 0.02
CTTN-202ENST00000346329 ARHGEF37A1IGU5 675 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 CSKP41240 450 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 GALNT2Q10471 571 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 PEX6Q13608 980 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 CHI3L2Q15782 390 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 FBXW10Q5XX13 1052 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 TADA2BQ86TJ2 420 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 RFWD2Q8NHY2 731 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 NSMCE1Q8WV22 266 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 RUBCNQ92622 972 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 PACSIN3Q9UKS6 424 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 NEU3Q9UQ49 428 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 SH3BP1Q9Y3L3 701 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 KIAA0754O94854 1291 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 HAUS5O94927 633 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 COL6A1P12109 1028 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 SOX11P35716 441 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 SLC11A2P49281 568 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 PRPSAP1Q14558 356 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 ANKRD20A4Q4UJ75 823 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 CNSTQ6PJW8 725 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 TMEM150AQ86TG1 271 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 TMEM25Q86YD3 366 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 MFN1Q8IWA4 741 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 CACNA2D3Q8IZS8 1091 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 APBB2Q92870 758 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 DNAJC1Q96KC8 554 aaKnown RBP15.14■□□□□ 0.01
CTTN-202ENST00000346329 SLCO3A1Q9UIG8 710 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 GOLGA8QA0A0J9YX86 632 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 GOLGA8OA6NCC3 632 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 GOLGA8NF8WBI6 632 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 TK2O00142 265 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 POLBP06746 335 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 ELAVL2Q12926 359 aaKnown RBP15.14■□□□□ 0.01
CTTN-202ENST00000346329 RCN2Q14257 317 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 USP10Q14694 798 aaKnown RBP15.14■□□□□ 0.01
CTTN-202ENST00000346329 TMEM240Q5SV17 173 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 N4BP2L1Q5TBK1 243 aaPredicted RBP15.14■□□□□ 0.01
CTTN-202ENST00000346329 ELMO2Q96JJ3 720 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 MARK4Q96L34 752 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 SLC46A2Q9BY10 475 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 SAGE1Q9NXZ1 904 aa15.14■□□□□ 0.01
CTTN-202ENST00000346329 MARCH4Q9P2E8 410 aaPredicted RBP15.14■□□□□ 0.01
CTTN-202ENST00000346329 DRD4P21917 467 aa15.13■□□□□ 0.01
CTTN-202ENST00000346329 NKX3-2P78367 333 aa15.13■□□□□ 0.01
CTTN-202ENST00000346329 GRM3Q14832 879 aa15.13■□□□□ 0.01
CTTN-202ENST00000346329 GKAP1Q5VSY0 366 aaPredicted RBP15.13■□□□□ 0.01
CTTN-202ENST00000346329 RIPOR1Q6ZS17 1223 aa15.13■□□□□ 0.01
CTTN-202ENST00000346329 BZW1Q7L1Q6 419 aaKnown RBP15.13■□□□□ 0.01
CTTN-202ENST00000346329 TTC7BQ86TV6 843 aa15.13■□□□□ 0.01
CTTN-202ENST00000346329 SLC26A11Q86WA9 606 aa15.13■□□□□ 0.01
CTTN-202ENST00000346329 EFCAB3Q8N7B9 438 aa15.13■□□□□ 0.01
CTTN-202ENST00000346329 PHF21BQ96EK2 531 aa15.13■□□□□ 0.01
CTTN-202ENST00000346329 CERS2Q96G23 380 aa15.13■□□□□ 0.01
CTTN-202ENST00000346329 FUBP3Q96I24 572 aaKnown RBP eCLIP15.13■□□□□ 0.01
CTTN-202ENST00000346329 ARHGEF38Q9NXL2 777 aa15.13■□□□□ 0.01
CTTN-202ENST00000346329 AFF4Q9UHB7 1163 aaKnown RBP15.13■□□□□ 0.01
CTTN-202ENST00000346329 FAM237BA0A1B0GVD1 139 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms