RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 CDC42EP4Q9H3Q1 356 aaKnown RBP16.6■□□□□ 0.25
CEACAM1-202ENST00000344391 EBF3Q9H4W6 596 aa16.6■□□□□ 0.25
CEACAM1-202ENST00000344391 XAB2Q9HCS7 855 aaKnown RBP16.6■□□□□ 0.25
CEACAM1-202ENST00000344391 UBP1Q9NZI7 540 aa16.6■□□□□ 0.25
CEACAM1-202ENST00000344391 GGA2Q9UJY4 613 aa16.6■□□□□ 0.25
CEACAM1-202ENST00000344391 CXorf51AA0A1B0GTR3 108 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 GOLGA6CA6NDK9 693 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 GOLGA6BA6NDN3 693 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 H3BQ06 376 aaPredicted RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 AVILO75366 819 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 MT-CYBP00156 380 aaPredicted RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 GOLGA6DP0CG33 693 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 MLNP12872 115 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 MAGEA3P43357 314 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 GEMP55040 296 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 SPARCL1Q14515 664 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 LRRC8BQ6P9F7 803 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 KIAA0907Q7Z7F0 614 aaPredicted RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 PRPF39Q86UA1 669 aaKnown RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 NAT16Q8N8M0 369 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 UBLCP1Q8WVY7 318 aaPredicted RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 MYLIPQ8WY64 445 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 MGME1Q9BQP7 344 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 CINPQ9BW66 212 aaPredicted RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 EPB41L4BQ9H329 900 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 PABPC3Q9H361 631 aaKnown RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 LRRC40Q9H9A6 602 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 VIPAS39Q9H9C1 493 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 HPS4Q9NQG7 708 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 HAUS2Q9NVX0 235 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 GOLGA6AQ9NYA3 693 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 EPS15L1Q9UBC2 864 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 MIA3Q5JRA6 1907 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 ECI2O75521 394 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 BANF1O75531 89 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 MT-CO1P00395 513 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 MMP2P08253 660 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 PABPC1P11940 636 aaKnown RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 PSMC3P17980 439 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 DSC2Q02487 901 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 MTM1Q13496 603 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 DMC1Q14565 340 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 FASTKD3Q14CZ7 662 aaKnown RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 BBS9Q3SYG4 887 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 FUT11Q495W5 492 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 YAF2Q8IY57 180 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 ZBED8Q8IZ13 594 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 IQCKQ8N0W5 287 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 TADA1Q96BN2 335 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 C9orf72Q96LT7 481 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 XPO6Q96QU8 1125 aaKnown RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 CDX2Q99626 313 aaPredicted RBP16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 KXD1Q9BQD3 176 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 ECT2Q9H8V3 914 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 VPS45Q9NRW7 570 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 NINJ2Q9NZG7 142 aa16.59■□□□□ 0.25
CEACAM1-202ENST00000344391 GRXCR2A6NFK2 248 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 OTOL1A6NHN0 477 aaPredicted RBP16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 TRIM24O15164 1050 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 RIPK2O43353 540 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 TMCC1O94876 653 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 TTC4O95801 387 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 CISD3P0C7P0 127 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 CR2P20023 1033 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 CD86P42081 329 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 GEMIN4P57678 1058 aaKnown RBP16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 SLC20A2Q08357 652 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 MPP3Q13368 585 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 OLIG2Q13516 323 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 GRM2Q14416 872 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 IHHQ14623 411 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 KYNUQ16719 465 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 GAB4Q2WGN9 574 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 UBAP2Q5T6F2 1119 aaKnown RBP16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 KDELC1Q6UW63 502 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 ETFBKMTQ8IXQ9 262 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 AGGF1Q8N302 714 aaeCLIP16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 SEMA3CQ99985 751 aa16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 WDR83Q9BRX9 315 aaKnown RBP16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 UBE2ZQ9H832 354 aaPredicted RBP16.58■□□□□ 0.24
CEACAM1-202ENST00000344391 TTC24A2A3L6 582 aaPredicted RBP16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 USP12O75317 370 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 ADRA1AP35348 466 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 RGRP47804 291 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 SERPINH1P50454 418 aaKnown RBP16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 SKOR1P84550 965 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 CCDC85BQ15834 202 aaPredicted RBP16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 DNAJC21Q5F1R6 531 aaKnown RBP16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 HP1BP3Q5SSJ5 553 aaPredicted RBP16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 CFAP58Q5T655 872 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 NAPEPLDQ6IQ20 393 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 GPR153Q6NV75 609 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 MTSS1LQ765P7 747 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 Q7L0L9 218 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 LINC00523Q86TU6 105 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 ADIPOR2Q86V24 386 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 C12orf40Q86WS4 652 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 AHI1Q8N157 1196 aa16.57■□□□□ 0.24
CEACAM1-202ENST00000344391 OR52K1Q8NGK4 314 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms