RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TRAFD1O14545 582 aaPredicted RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 PTPN1P18031 435 aaKnown RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 KLRC2P26717 231 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 PCBP1Q15365 356 aaKnown RBP eCLIP11.03□□□□□ -0.642e-6■■□□□ 13.9
RPL28-201ENST00000344063 AARS2Q5JTZ9 985 aaKnown RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 NEPROQ6NW34 567 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 ATXN3LQ9H3M9 355 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 CLK4Q9HAZ1 481 aaKnown RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 ABCB10Q9NRK6 738 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 PNPLA3Q9NST1 481 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 PCDHGB4Q9UN71 923 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 CAB39Q9Y376 341 aaPredicted RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 MYH3P11055 1940 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 TMEM247A6NEH6 219 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 MDM4O15151 490 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 ASNA1O43681 348 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 UGT1A9O60656 530 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 CABYRO75952 493 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 LDLRP01130 860 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 RPLP2P05387 115 aaKnown RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 CD48P09326 243 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 HLA-DPA1P20036 260 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 JAK1P23458 1154 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 TAF2Q6P1X5 1199 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 SYTL1Q8IYJ3 562 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 TMEM86AQ8N2M4 240 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 CINPQ9BW66 212 aaPredicted RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 REXO4Q9GZR2 422 aaKnown RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 TKTL2Q9H0I9 626 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 UGT1A7Q9HAW7 530 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 UGT1A10Q9HAW8 530 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 UGT1A8Q9HAW9 530 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 CDHR5Q9HBB8 845 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 CASS4Q9NQ75 786 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 RAD54BQ9Y620 910 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 DGKBQ9Y6T7 804 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 A6NHS1 94 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 ZNF197O14709 1029 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 ARF4P18085 180 aaPredicted RBP11.02□□□□□ -0.64
RPL28-201ENST00000344063 ATP5F1P24539 256 aaPredicted RBP11.02□□□□□ -0.64
RPL28-201ENST00000344063 MPSTP25325 297 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 CDH15P55291 814 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 VGLL4Q14135 290 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 MGAT5BQ3V5L5 792 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 OR8H2Q8N162 312 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 C1orf127Q8N9H9 656 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 SNX31Q8N9S9 440 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 DNAJB3Q8WWF6 145 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 P2RY11Q96G91 374 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 ZNF512Q96ME7 567 aaPredicted RBP11.02□□□□□ -0.64
RPL28-201ENST00000344063 GPR63Q9BZJ6 419 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 POMKQ9H5K3 350 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 ARMC7Q9H6L4 198 aa11.02□□□□□ -0.64
RPL28-201ENST00000344063 NUP98P52948 1817 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 C4AP0C0L4 1744 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 C4BP0C0L5 1744 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 CICQ96RK0 1608 aaPredicted RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 KLRG2A4D1S0 409 aaPredicted RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 PSMD12O00232 456 aaPredicted RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 RNASEH1O60930 286 aaKnown RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 CRTAMO95727 393 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 MT-ND1P03886 318 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 HSMCR30P0CW71 290 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 ALOX12P18054 663 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 ERCC2P18074 760 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 GRIA4P48058 902 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 TWF1Q12792 350 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 FRG1Q14331 258 aaKnown RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 NFE2Q16621 373 aaPredicted RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 GJC2Q5T442 439 aaPredicted RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 RNF219Q5W0B1 726 aaPredicted RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 DNAJC14Q6Y2X3 702 aaPredicted RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 ANKRD23Q86SG2 305 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 SLC51AQ86UW1 340 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 RELL1Q8IUW5 271 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 DSELQ8IZU8 1212 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 CSPG4P5Q96PW8 444 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 MIPEPQ99797 713 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 KCTD14Q9BQ13 255 aaPredicted RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 OR12D3Q9UGF7 316 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 ALS2Q96Q42 1657 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 ZSCAN9O15535 394 aaPredicted RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 TSC22D2O75157 780 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 NFKB1P19838 968 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 OR1G1P47890 313 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 HARS2P49590 506 aaKnown RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 LIPMQ5VYY2 423 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 ILDR2Q71H61 639 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 NAT8LQ8N9F0 302 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 BPIFB6Q8NFQ5 453 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 SEPT5Q99719 369 aaPredicted RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 COQ7Q99807 217 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 OLA1Q9NTK5 396 aaKnown RBP11.02□□□□□ -0.65
RPL28-201ENST00000344063 SYBUQ9NX95 663 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 STK39Q9UEW8 545 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 DERAQ9Y315 318 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 NDUFAF1Q9Y375 327 aa11.02□□□□□ -0.65
RPL28-201ENST00000344063 TMEM63AO94886 807 aa11.01□□□□□ -0.65
RPL28-201ENST00000344063 GJB1P08034 283 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms