RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 DCAF6Q58WW2 860 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 SAMD4BQ5PRF9 694 aaKnown RBP9.8□□□□□ -0.84
HOXA1-201ENST00000343060 TTC33Q6PID6 262 aaPredicted RBP9.8□□□□□ -0.84
HOXA1-201ENST00000343060 CES3Q6UWW8 571 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 TMEM110Q86TL2 294 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 EPHX4Q8IUS5 362 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 CPNE9Q8IYJ1 553 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 GOLM1Q8NBJ4 401 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 ZNF669Q96BR6 464 aaPredicted RBP9.8□□□□□ -0.84
HOXA1-201ENST00000343060 PPP1R36Q96LQ0 422 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 HEXIM2Q96MH2 286 aaKnown RBP9.8□□□□□ -0.84
HOXA1-201ENST00000343060 PCYT2Q99447 389 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 TUBA1CQ9BQE3 449 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 ADI1Q9BV57 179 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 TMEM39BQ9GZU3 492 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 ADAMTS10Q9H324 1103 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 NOL11Q9H8H0 719 aaKnown RBP9.8□□□□□ -0.84
HOXA1-201ENST00000343060 CD320Q9NPF0 282 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 PIH1D1Q9NWS0 290 aaKnown RBP9.8□□□□□ -0.84
HOXA1-201ENST00000343060 MFHAS1Q9Y4C4 1052 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 CROCCQ5TZA2 2017 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 LTBP4Q8N2S1 1624 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 A0A1W2PPW3 197 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 DYTNA2CJ06 578 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 MFSD11O43934 449 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 DDHD2O94830 711 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 CPNE6O95741 557 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 NFICP08651 508 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 KRT19P08727 400 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 GNAO1P09471 354 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 CKMT2P17540 419 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 CDH3P22223 829 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 SCNN1AP37088 669 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 FSTL1Q12841 308 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 ZBTB17Q13105 803 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 PMS2P3Q13401 168 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 ANO4Q32M45 955 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 NXNQ6DKJ4 435 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 TMEM53Q6P2H8 277 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 ZNF786Q8N393 782 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 PCDH20Q8N6Y1 951 aaKnown RBP9.8□□□□□ -0.84
HOXA1-201ENST00000343060 PDPRQ8NCN5 879 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 OR2T34Q8NGX1 318 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 OR2T3Q8NH03 318 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 ZUFSPQ96AP4 578 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 P2RY11Q96G91 374 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 VPS39Q96JC1 886 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 AGAP2Q99490 1192 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 YTHDF1Q9BYJ9 559 aaKnown RBP9.8□□□□□ -0.84
HOXA1-201ENST00000343060 C2orf40Q9H1Z8 148 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 CCM2LQ9NUG4 571 aaPredicted RBP9.8□□□□□ -0.84
HOXA1-201ENST00000343060 FAM32AQ9Y421 112 aaKnown RBP9.8□□□□□ -0.84
HOXA1-201ENST00000343060 F5H423 210 aaPredicted RBP9.79□□□□□ -0.84
HOXA1-201ENST00000343060 GIPC1O14908 333 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 STAU1O95793 577 aaKnown RBP9.79□□□□□ -0.84
HOXA1-201ENST00000343060 TFE3P19532 575 aaPredicted RBP9.79□□□□□ -0.84
HOXA1-201ENST00000343060 RPL10P27635 214 aaKnown RBP9.79□□□□□ -0.84
HOXA1-201ENST00000343060 BMXP51813 675 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 NAGLUP54802 743 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 MERTKQ12866 999 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 GOLGA7BQ2TAP0 167 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 HSDL1Q3SXM5 330 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 FGD3Q5JSP0 725 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 IER5Q5VY09 327 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 PMF1Q6P1K2 205 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 CAMK1DQ8IU85 385 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ZDHHC17Q8IUH5 632 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ZBTB8OSQ8IWT0 167 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 TTC39CQ8N584 583 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ACVR1CQ8NER5 493 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ACDQ96AP0 544 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 MOCOSQ96EN8 888 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 GMLQ99445 158 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 LGMNQ99538 433 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 MAF1Q9H063 256 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 TASP1Q9H6P5 420 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 LRRC4Q9HBW1 653 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 CASS4Q9NQ75 786 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ANLNQ9NQW6 1124 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 DOLKQ9UPQ8 538 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ERGIC3Q9Y282 383 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 CTDP1Q9Y5B0 961 aaPredicted RBP9.79□□□□□ -0.84
HOXA1-201ENST00000343060 FNDC1Q4ZHG4 1894 aaPredicted RBP9.79□□□□□ -0.84
HOXA1-201ENST00000343060 A0A0G2JMZ2 1700 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 LRRC37A2A6NM11 1700 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 FOXD2O60548 495 aaPredicted RBP9.79□□□□□ -0.84
HOXA1-201ENST00000343060 TIPRLO75663 272 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 GABBR2O75899 941 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 CXCL8P10145 99 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ZNF24P17028 368 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 NDST1P52848 882 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 OAZ1P54368 228 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 RALGDSQ12967 914 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 DGKZQ13574 1117 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 SMAD1Q15797 465 aaKnown RBP9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ATP6AP1Q15904 470 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 DGKDQ16760 1214 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 OGFOD2Q6N063 350 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 FAM117BQ6P1L5 589 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 XKR5Q6UX68 686 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms