RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 FTLP02792 175 aaPredicted RBP20.54■□□□□ 0.88
SYNE2-201ENST00000341472 PROS1P07225 676 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 GZMAP12544 262 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 PRKCIP41743 596 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 NXPH1P58417 271 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 IL9RQ01113 521 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 KLHL30Q0D2K2 578 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 ZNF571Q7Z3V5 609 aaPredicted RBP20.54■□□□□ 0.88
SYNE2-201ENST00000341472 TMC6Q7Z403 805 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 RAB44Q7Z6P3 723 aaPredicted RBP20.54■□□□□ 0.88
SYNE2-201ENST00000341472 SLCO6A1Q86UG4 719 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 RYBPQ8N488 228 aaPredicted RBP20.54■□□□□ 0.88
SYNE2-201ENST00000341472 RTL3Q8N8U3 475 aaKnown RBP20.54■□□□□ 0.88
SYNE2-201ENST00000341472 ADAMTS14Q8WXS8 1223 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 EPAS1Q99814 870 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 CBX8Q9HC52 389 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 NEU3Q9UQ49 428 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 MSRB2Q9Y3D2 182 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 ADAMTS9Q9P2N4 1935 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 CACNA1BQ00975 2339 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 RNF103O00237 685 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 SLC31A1O15431 190 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 PCDH8O95206 1070 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 CCNHP51946 323 aaPredicted RBP20.53■□□□□ 0.88
SYNE2-201ENST00000341472 OGDHQ02218 1023 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 OVGP1Q12889 678 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 INAVAQ3KP66 663 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 PLEKHA7Q6IQ23 1121 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 UNQ6494/PRO21346Q6UXR6 183 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 LEKR1Q6ZMV7 388 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 IQCHQ86VS3 1027 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 HORMAD1Q86X24 394 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 ZNF354CQ86Y25 554 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 BAHD1Q8TBE0 780 aaPredicted RBP20.53■□□□□ 0.88
SYNE2-201ENST00000341472 TM6SF2Q9BZW4 377 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 CATSPERBQ9H7T0 1116 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 ERVMER34-1Q9H9K5 563 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 KLK13Q9UKR3 277 aa20.53■□□□□ 0.88
SYNE2-201ENST00000341472 MAP1BP46821 2468 aaKnown RBP20.52■□□□□ 0.88
SYNE2-201ENST00000341472 FAM221BA6H8Z2 402 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 ZSCAN5CA6NGD5 496 aaPredicted RBP20.52■□□□□ 0.88
SYNE2-201ENST00000341472 C1QTNF9BB2RNN3 333 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 DDX3XO00571 662 aaKnown RBP eCLIP20.52■□□□□ 0.88
SYNE2-201ENST00000341472 BUB1O43683 1085 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 ITGAVP06756 1048 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 ATXN1LP0C7T5 689 aaKnown RBP20.52■□□□□ 0.88
SYNE2-201ENST00000341472 C1QTNF9P0C862 333 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 SKILP12757 684 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 PSMA2P25787 234 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 ARRB1P49407 418 aaPredicted RBP20.52■□□□□ 0.88
SYNE2-201ENST00000341472 YBEYP58557 167 aaPredicted RBP20.52■□□□□ 0.88
SYNE2-201ENST00000341472 SNRPD1P62314 119 aaKnown RBP20.52■□□□□ 0.88
SYNE2-201ENST00000341472 FANCCQ00597 558 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 FIGNQ5HY92 759 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 FBXL19Q6PCT2 694 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 LUZP1Q86V48 1076 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 KLK6Q92876 244 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 KLHDC7BQ96G42 594 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 LRIG1Q96JA1 1093 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 FEM1CQ96JP0 617 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 DONSONQ9NYP3 566 aa20.52■□□□□ 0.88
SYNE2-201ENST00000341472 TMEM191CA6NGB0 347 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 WASH4PA8MWX3 477 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 YKT6O15498 198 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 TNFSF14O43557 240 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 POP4O95707 220 aaKnown RBP20.51■□□□□ 0.87
SYNE2-201ENST00000341472 ITGB7P26010 798 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 RXRGP48443 463 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 NEK3P51956 506 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 SHBQ15464 509 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 ZNF284Q2VY69 593 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 MYLK3Q32MK0 819 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 E4F1Q66K89 784 aaPredicted RBP20.51■□□□□ 0.87
SYNE2-201ENST00000341472 SPATS2Q86XZ4 545 aaKnown RBP20.51■□□□□ 0.87
SYNE2-201ENST00000341472 DNAAF5Q86Y56 855 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 GATAD2AQ86YP4 633 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 OXR1Q8N573 874 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 TTYH3Q9C0H2 523 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 NOL6Q9H6R4 1146 aaKnown RBP20.51■□□□□ 0.87
SYNE2-201ENST00000341472 ZDHHC6Q9H6R6 413 aa20.51■□□□□ 0.87
SYNE2-201ENST00000341472 GOLGA8CPA6NN73 597 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 RASA4BC9J798 803 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 RASA4O43374 803 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 RNF8O76064 485 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 GSRP00390 522 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 PRLRP16471 622 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 AKT2P31751 481 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 UBASH3AP57075 661 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 PARP15Q460N3 678 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 UMODL1-AS1Q8N2C9 162 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 OR2AP1Q8NGE2 309 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 SAP25Q8TEE9 199 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 CASKIN2Q8WXE0 1202 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 GATA6Q92908 595 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 CNOT8Q9UFF9 292 aaKnown RBP20.5■□□□□ 0.87
SYNE2-201ENST00000341472 PCSK1NQ9UHG2 260 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 CA5BQ9Y2D0 317 aa20.5■□□□□ 0.87
SYNE2-201ENST00000341472 GOLGA6L19H0YKK7 550 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 KRIT1O00522 736 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 FGF10O15520 208 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms