RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SDCCAG3Q96C92 435 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 TXNDC15Q96J42 360 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 MAP6Q96JE9 813 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 KCNK16Q96T55 309 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 EMILIN2Q9BXX0 1053 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 COQ10BQ9H8M1 238 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 APOBEC3GQ9HC16 384 aaKnown RBP12.03□□□□□ -0.48
RTN3-203ENST00000341307 AVENQ9NQS1 362 aaPredicted RBP12.03□□□□□ -0.48
RTN3-203ENST00000341307 PARVAQ9NVD7 372 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 STK39Q9UEW8 545 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 CCDC195A0A1B0GUA6 201 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 CA12O43570 354 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 PIGRP01833 764 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 ZNF286BP0CG31 522 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 MAPK10P53779 464 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 GALK2Q01415 458 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 SLC18A2Q05940 514 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 GALNT1Q10472 559 aaPredicted RBP12.03□□□□□ -0.48
RTN3-203ENST00000341307 IKBKEQ14164 716 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 AGAP9Q5VTM2 703 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 TAPT1Q6NXT6 567 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 OTOP3Q7RTS5 596 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 ZNF296Q8WUU4 475 aaPredicted RBP12.03□□□□□ -0.48
RTN3-203ENST00000341307 SH3YL1Q96HL8 342 aaPredicted RBP12.03□□□□□ -0.48
RTN3-203ENST00000341307 C1orf112Q9NSG2 853 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 NDFIP2Q9NV92 336 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 ABI2Q9NYB9 513 aaPredicted RBP12.03□□□□□ -0.48
RTN3-203ENST00000341307 FETUBQ9UGM5 382 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 SIP14410 1827 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 CNTNAP2Q9UHC6 1331 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 CASP8AP2Q9UKL3 1982 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 TRIM64A6NGJ6 449 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 ZNF839A8K0R7 811 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 B8ZZF3 427 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 H0YJX3 145 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 DNALI1O14645 258 aaPredicted RBP12.02□□□□□ -0.48
RTN3-203ENST00000341307 FAM189A1O60320 539 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 SPAG6O75602 509 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 RNASEH2AO75792 299 aaKnown RBP12.02□□□□□ -0.48
RTN3-203ENST00000341307 MCF2P10911 925 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 SSTR1P30872 391 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 COPZ1P61923 177 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 CLDN10P78369 228 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 TMPRSS15P98073 1019 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 ARHGAP1Q07960 439 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 SLFN12LQ6IEE8 588 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 EFCAB12Q6NXP0 572 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 PLPPR4Q7Z2D5 763 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 ZNF354CQ86Y25 554 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 FAM47BQ8NA70 645 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 DDX1Q92499 740 aaKnown RBP12.02□□□□□ -0.48
RTN3-203ENST00000341307 FAM167AQ96KS9 214 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 AIFM2Q9BRQ8 373 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 ANKRD60Q9BZ19 345 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 NOL6Q9H6R4 1146 aaKnown RBP12.02□□□□□ -0.48
RTN3-203ENST00000341307 TMEM134Q9H6X4 195 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 MINDY3Q9H8M7 445 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 SNTG2Q9NY99 539 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 IKBKGQ9Y6K9 419 aa12.02□□□□□ -0.48
RTN3-203ENST00000341307 SNTNA6NMZ2 147 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 INO80B-WBP1J3KQ70 363 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 ACOX3O15254 700 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 KCNH1O95259 989 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 CST3P01034 146 aaPredicted RBP12.02□□□□□ -0.49
RTN3-203ENST00000341307 CFHP08603 1231 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 IQCF3P0C7M6 154 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 CDH1P12830 882 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 RACK1P63244 317 aaKnown RBP12.02□□□□□ -0.49
RTN3-203ENST00000341307 ECT2LQ008S8 904 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 ZNF792Q3KQV3 632 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 IER5Q5VY09 327 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 UGT3A1Q6NUS8 523 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 LLGL2Q6P1M3 1020 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 MAMDC4Q6UXC1 1216 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 SIX6OS1Q8N1H7 587 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 ZNF564Q8TBZ8 553 aaPredicted RBP12.02□□□□□ -0.49
RTN3-203ENST00000341307 E2F7Q96AV8 911 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 RMDN1Q96DB5 314 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 YME1L1Q96TA2 773 aa12.02□□□□□ -0.49
RTN3-203ENST00000341307 APOBEC2Q9Y235 224 aaKnown RBP12.02□□□□□ -0.49
RTN3-203ENST00000341307 IGKV6-21A0A0C4DH24 114 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 LOC100653049A0A140TA62 436 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 ASB14A6NK59 587 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 A8MX80 341 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 CLDN25C9JDP6 229 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 GPR25O00155 361 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 AURKAO14965 403 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 KRT34O76011 436 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 SEC24DO94855 1032 aaPredicted RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 BCL10O95999 233 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 MT-ND3P03897 115 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 PRKCBP05771 671 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 XRCC1P18887 633 aaPredicted RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 CCNA2P20248 432 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 RFC1P35251 1148 aaPredicted RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 MSX2P35548 267 aaPredicted RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 B2MP61769 119 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 PRKCQQ04759 706 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 TUBA3CQ13748 450 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 FLOT2Q14254 428 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms