RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 KIAA1522Q9P206 1035 aaPredicted RBP17.63■□□□□ 0.41
CLDN4-201ENST00000340958 SEPT3Q9UH03 358 aa17.63■□□□□ 0.41
CLDN4-201ENST00000340958 MYO18AQ92614 2054 aaKnown RBP17.62■□□□□ 0.41
CLDN4-201ENST00000340958 H3BQF6 201 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 AP3B1O00203 1094 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 RASGRF2O14827 1237 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 SUN1O94901 812 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 HOXD9P28356 352 aaPredicted RBP17.62■□□□□ 0.41
CLDN4-201ENST00000340958 MZF1P28698 734 aaPredicted RBP17.62■□□□□ 0.41
CLDN4-201ENST00000340958 SSTR1P30872 391 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 SLCO1A2P46721 670 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 IFNAR2P48551 515 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 RFTN1Q14699 578 aaPredicted RBP17.62■□□□□ 0.41
CLDN4-201ENST00000340958 PCSK7Q16549 785 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 CES5AQ6NT32 575 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 ZNF534Q76KX8 674 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 KDELC2Q7Z4H8 507 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 TEX26Q8N6G2 289 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 ZNF419Q96HQ0 510 aaPredicted RBP17.62■□□□□ 0.41
CLDN4-201ENST00000340958 ASB2Q96Q27 587 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 ACE2Q9BYF1 805 aaPredicted RBP17.62■□□□□ 0.41
CLDN4-201ENST00000340958 BFARQ9NZS9 450 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 SAMD15Q9P1V8 674 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 WNT6Q9Y6F9 365 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 TEX264Q9Y6I9 313 aa17.62■□□□□ 0.41
CLDN4-201ENST00000340958 EXOC1LA0A1B0GW35 172 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 GFRA2O00451 464 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 RNF40O75150 1001 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 ABHD2P08910 425 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 MGAT1P26572 445 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 CD86P42081 329 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 USP4Q13107 963 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 MPP3Q13368 585 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 OLIG2Q13516 323 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 STAT4Q14765 748 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 LEXMQ3ZCV2 418 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 ATAT1Q5SQI0 421 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 TMEM184AQ6ZMB5 413 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 TMEM25Q86YD3 366 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 NPAS3Q8IXF0 933 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 RIN3Q8TB24 985 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 FGF13Q92913 245 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 OTUB2Q96DC9 234 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 STAMBPL1Q96FJ0 436 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 MSLNLQ96KJ4 702 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 SH3GL2Q99962 352 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 TBL1YQ9BQ87 522 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 C2orf49Q9BVC5 232 aaPredicted RBP17.61■□□□□ 0.41
CLDN4-201ENST00000340958 LINC00597Q9H2U6 94 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 PDFQ9HBH1 243 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 DUS2Q9NX74 493 aaKnown RBP17.61■□□□□ 0.41
CLDN4-201ENST00000340958 CACNG3O60359 315 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 VIPR2P41587 438 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 DSC2Q02487 901 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 CDH17Q12864 832 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 LONRF1Q17RB8 773 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 AAK1Q2M2I8 961 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 KCTD16Q68DU8 428 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 KCTD11Q693B1 232 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 LINGO4Q6UY18 593 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 IGDCC3Q8IVU1 814 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 MPP5Q8N3R9 675 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 WFDC5Q8TCV5 224 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 EPS8L3Q8TE67 593 aaKnown RBP17.61■□□□□ 0.41
CLDN4-201ENST00000340958 IRF7Q92985 503 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 EBNA1BP2Q99848 306 aaKnown RBP17.61■□□□□ 0.41
CLDN4-201ENST00000340958 SEMA3CQ99985 751 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 FICDQ9BVA6 458 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 ROPN1BQ9BZX4 212 aaPredicted RBP17.61■□□□□ 0.41
CLDN4-201ENST00000340958 ROPN1Q9HAT0 212 aaPredicted RBP17.61■□□□□ 0.41
CLDN4-201ENST00000340958 SPHK2Q9NRA0 654 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 ACTL7AQ9Y615 435 aa17.61■□□□□ 0.41
CLDN4-201ENST00000340958 TTC24A2A3L6 582 aaPredicted RBP17.6■□□□□ 0.41
CLDN4-201ENST00000340958 POLR3GO15318 223 aaPredicted RBP17.6■□□□□ 0.41
CLDN4-201ENST00000340958 RGS16O15492 202 aaPredicted RBP17.6■□□□□ 0.41
CLDN4-201ENST00000340958 SNAP91O60641 907 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 SPAG6O75602 509 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 AGTP01019 485 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 TCF3P15923 654 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 TSHRP16473 764 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 HOXB8P17481 243 aaPredicted RBP17.6■□□□□ 0.41
CLDN4-201ENST00000340958 GPX6P59796 221 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 CRADDP78560 199 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 FAM78AQ5JUQ0 283 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 FYB2Q5VWT5 728 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 RETSATQ6NUM9 610 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 FIBINQ8TAL6 211 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 FBF1Q8TES7 1133 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 SMARCD2Q92925 531 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 ARL8AQ96BM9 186 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 IMP4Q96G21 291 aaKnown RBP17.6■□□□□ 0.41
CLDN4-201ENST00000340958 WDR83Q9BRX9 315 aaKnown RBP17.6■□□□□ 0.41
CLDN4-201ENST00000340958 TMBIM4Q9HC24 238 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 VPS45Q9NRW7 570 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 GDE1Q9NZC3 331 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 CDH22Q9UJ99 828 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 MUC3AQ02505 3323 aa17.6■□□□□ 0.41
CLDN4-201ENST00000340958 POC1B-GALNT4F8VUJ3 575 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 MAGEA3P43357 314 aa17.59■□□□□ 0.41
CLDN4-201ENST00000340958 LMAN2Q12907 356 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms