RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 HAPLN1P10915 354 aaPredicted RBP11.26□□□□□ -0.61
LRP1-202ENST00000338962 RHOQP17081 205 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 PAPOLAP51003 745 aaKnown RBP11.26□□□□□ -0.61
LRP1-202ENST00000338962 SETDB1Q15047 1291 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 SNCBQ16143 134 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 ANKRD20A4Q4UJ75 823 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 ARTNQ5T4W7 220 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 AFMIDQ63HM1 303 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 PRSS55Q6UWB4 352 aaPredicted RBP11.26□□□□□ -0.61
LRP1-202ENST00000338962 IPMKQ8NFU5 416 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 MFSD3Q96ES6 412 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 ZNF419Q96HQ0 510 aaPredicted RBP11.26□□□□□ -0.61
LRP1-202ENST00000338962 FCRL5Q96RD9 977 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 GLOD4Q9HC38 313 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 NPHS2Q9NP85 383 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 RBM22Q9NW64 420 aaKnown RBP eCLIP11.26□□□□□ -0.61
LRP1-202ENST00000338962 ZCWPW2A0A1B0GU75 182 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 TLR5O60602 858 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 RASSF9O75901 435 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 DCTN3O75935 186 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 VNN2O95498 520 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 MT-CYBP00156 380 aaPredicted RBP11.26□□□□□ -0.61
LRP1-202ENST00000338962 TPH1P17752 444 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 BGNP21810 368 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 NDST2P52849 883 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 FRG1Q14331 258 aaKnown RBP11.26□□□□□ -0.61
LRP1-202ENST00000338962 HSP90AA5PQ58FG0 334 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 TRIM42Q8IWZ5 723 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 UMODL1-AS1Q8N2C9 162 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 MAGEC3Q8TD91 643 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 LRRC37BQ96QE4 947 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 FSD1LQ9BXM9 530 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 SLC40A1Q9NP59 571 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 ENTPD7Q9NQZ7 604 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 CHRAC1Q9NRG0 131 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 COMMD8Q9NX08 183 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 PPARGC1AQ9UBK2 798 aaKnown RBP11.26□□□□□ -0.61
LRP1-202ENST00000338962 SOX13Q9UN79 622 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 SLC12A8A0AV02 714 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 HIDE1A8MVS5 230 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 C2CD2LO14523 706 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 KLF11O14901 512 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 TEX28O15482 410 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 HLA-DQB2P05538 268 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 HMBSP08397 361 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 CNPP09543 421 aaKnown RBP11.25□□□□□ -0.61
LRP1-202ENST00000338962 SLC8A1P32418 973 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 GEMP55040 296 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 CCDC15Q0P6D6 951 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 OVGP1Q12889 678 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 RAB33AQ14088 237 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 ACBD5Q5T8D3 534 aaPredicted RBP11.25□□□□□ -0.61
LRP1-202ENST00000338962 GRTP1Q5TC63 336 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 RAP1GAP2Q684P5 730 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 KYAT3Q6YP21 454 aaKnown RBP11.25□□□□□ -0.61
LRP1-202ENST00000338962 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 STRA8Q7Z7C7 330 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 KCNMB4Q86W47 210 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 ZNF354CQ86Y25 554 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 KLHDC8BQ8IXV7 354 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 MICAL1Q8TDZ2 1067 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 GIPC2Q8TF65 315 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 AUTS2Q8WXX7 1259 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 KLHL5Q96PQ7 755 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 TBL1YQ9BQ87 522 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 TRIM55Q9BYV6 548 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 C20orf96Q9NUD7 363 aaPredicted RBP11.25□□□□□ -0.61
LRP1-202ENST00000338962 TMEM248Q9NWD8 314 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 GBF1Q92538 1859 aa11.25□□□□□ -0.61
LRP1-202ENST00000338962 IGLV3-10A0A075B6K4 115 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
LRP1-202ENST00000338962 ADAM12O43184 909 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 GLRA3O75311 464 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 DNAJC8O75937 253 aaPredicted RBP11.24□□□□□ -0.61
LRP1-202ENST00000338962 ABLIM3O94929 683 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 ATF6P18850 670 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 TYK2P29597 1187 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 SPRP35270 261 aaPredicted RBP11.24□□□□□ -0.61
LRP1-202ENST00000338962 RENBPP51606 427 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 KPNA1P52294 538 aaPredicted RBP11.24□□□□□ -0.61
LRP1-202ENST00000338962 RING1Q06587 406 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 MTA1Q13330 715 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 HNRNPDQ14103 355 aaKnown RBP11.24□□□□□ -0.61
LRP1-202ENST00000338962 GALNTL6Q49A17 601 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 ALFQ53S48 1182 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 PLPP4Q5VZY2 271 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 ATG16L1Q676U5 607 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 ZNF683Q8IZ20 524 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 ZNF398Q8TD17 642 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 C10orf82Q8WW14 230 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 RPRD1AQ96P16 312 aaPredicted RBP11.24□□□□□ -0.61
LRP1-202ENST00000338962 AGAP2Q99490 1192 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 RBBP8Q99708 897 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 MECRQ9BV79 373 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 EMILIN2Q9BXX0 1053 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 NOL6Q9H6R4 1146 aaKnown RBP11.24□□□□□ -0.61
LRP1-202ENST00000338962 CCSER2Q9H7U1 834 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 SP110Q9HB58 689 aa11.24□□□□□ -0.61
LRP1-202ENST00000338962 DCTN4Q9UJW0 460 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms