RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 FUOMA2VDF0 154 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 SIGLEC16A6NMB1 481 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 EI24O14681 340 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 PAPSS1O43252 624 aaPredicted RBP13.4□□□□□ -0.26
COL2A1-201ENST00000337299 POU1F1P28069 291 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 HOXA10P31260 410 aaPredicted RBP13.4□□□□□ -0.26
COL2A1-201ENST00000337299 OXCT1P55809 520 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 CYP4F2P78329 520 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 CCNA1P78396 465 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 CYP4F3Q08477 520 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 PRR23CQ6ZRP0 262 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 ACMSDQ8TDX5 336 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 MOCOSQ96EN8 888 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 SOX17Q9H6I2 414 aaPredicted RBP13.4□□□□□ -0.26
COL2A1-201ENST00000337299 STMN3Q9NZ72 180 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 IGSF9Q9P2J2 1179 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 GRIA1P42261 906 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 CATSPER4Q7RTX7 472 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 TMEM161BQ8NDZ6 487 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 HIPK3Q9H422 1215 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 DNAJC28Q9NX36 388 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 GOLGA8CPA6NN73 597 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 CCT3P49368 545 aaKnown RBP13.4□□□□□ -0.26
COL2A1-201ENST00000337299 PRKAA2P54646 552 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 PHC1P78364 1004 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 GTF2BQ00403 316 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 MTA1Q13330 715 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 ZACNQ401N2 412 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 ZC3H12BQ5HYM0 836 aaKnown RBP13.4□□□□□ -0.26
COL2A1-201ENST00000337299 S100ZQ8WXG8 99 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 DHX33Q9H6R0 707 aaKnown RBP13.4□□□□□ -0.26
COL2A1-201ENST00000337299 ITM2CQ9NQX7 267 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 OLA1Q9NTK5 396 aaKnown RBP13.4□□□□□ -0.26
COL2A1-201ENST00000337299 CD274Q9NZQ7 290 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 NUDT5Q9UKK9 219 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 TSPAN16Q9UKR8 245 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 NRXN3Q9Y4C0 1643 aa13.4□□□□□ -0.26
COL2A1-201ENST00000337299 TRUB2O95900 331 aaKnown RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TFAP2AP05549 437 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 NCK1P16333 377 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 GMPRP36959 345 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 CCT8P50990 548 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 EFNA5P52803 228 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 CTBP1Q13363 440 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 AARS2Q5JTZ9 985 aaKnown RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 DACT2Q5SW24 774 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 ATF7IP2Q5U623 682 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TTC23Q5W5X9 447 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 NAT8LQ8N9F0 302 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 UTP15Q8TED0 518 aaKnown RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 CD101Q93033 1021 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 PPP1R10Q96QC0 940 aaKnown RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 SNRNP25Q9BV90 132 aaKnown RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 MAGEB5Q9BZ81 275 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 BTRCQ9Y297 605 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 CYP3A7-CYP3A51PA0A087WV96 503 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 MICAL2O94851 1124 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 CYP3A7P24462 503 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TM4SF1P30408 202 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 SLC5A2P31639 672 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 CAP2P40123 477 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 GBE1Q04446 702 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TMEM132DQ14C87 1099 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 SIX1Q15475 284 aaPredicted RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TAF12Q16514 161 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 ZC3H7AQ8IWR0 971 aaKnown RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 FAM126BQ8IXS8 530 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 OR2T34Q8NGX1 318 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 OR2T3Q8NH03 318 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 SEPT8Q92599 483 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 MIR1-1HGQ9H1L0 117 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 USE1Q9NZ43 259 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 OGTO15294 1046 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 ATG7O95352 703 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 LIPMQ5VYY2 423 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 MPP5Q8N3R9 675 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 MARVELD2Q8N4S9 558 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 ATPAF2Q8N5M1 289 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 RNF139Q8WU17 664 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 SNX19Q92543 992 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TMEM176AQ96HP8 235 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 FBXL20Q96IG2 436 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 MAF1Q9H063 256 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TLE6Q9H808 572 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 ACAD9Q9H845 621 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 CDHR5Q9HBB8 845 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 SPON1Q9HCB6 807 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 COMMD8Q9NX08 183 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 SMPD3Q9NY59 655 aaPredicted RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 PLK2Q9NYY3 685 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 FAM8A1Q9UBU6 413 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TUBGCP4Q9UGJ1 667 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TPRKBQ9Y3C4 175 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 SYNDIG1LA6NDD5 238 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 COQ9O75208 318 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 CXCL8P10145 99 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 RPS9P46781 194 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms