RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PHKA2P46019 1235 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 NUMBP49757 651 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 LIPMQ5VYY2 423 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 XKR5Q6UX68 686 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 ACOT1Q86TX2 421 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 CARM1Q86X55 608 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 FAM131BQ86XD5 332 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 CPNE9Q8IYJ1 553 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 FIBCD1Q8N539 461 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 SNX31Q8N9S9 440 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 DDHD1Q8NEL9 900 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 ACVR1CQ8NER5 493 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 MFSD3Q96ES6 412 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 NIFKQ9BYG3 293 aaKnown RBP13.92□□□□□ -0.18
SYNE3-201ENST00000334258 CCDC167Q9P0B6 97 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 CNOT11Q9UKZ1 510 aaKnown RBP13.92□□□□□ -0.18
SYNE3-201ENST00000334258 RNF103-CHMP3A0A140T963 221 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 HEATR9A2RTY3 570 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 ZNF839A8K0R7 811 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 HTRA2O43464 458 aaPredicted RBP13.92□□□□□ -0.18
SYNE3-201ENST00000334258 GPC4O75487 556 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 OCM2P0CE71 109 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 OCMP0CE72 109 aaPredicted RBP13.92□□□□□ -0.18
SYNE3-201ENST00000334258 C21orf59P57076 290 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 GPR107Q5VW38 600 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 LCLAT1Q6UWP7 414 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 SPATA6LQ8N4H0 392 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 CNTD1Q8N815 330 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 PBXIP1Q96AQ6 731 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 COX4I2Q96KJ9 171 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 KCTD15Q96SI1 283 aaPredicted RBP13.92□□□□□ -0.18
SYNE3-201ENST00000334258 OMDQ99983 421 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 VPS45Q9NRW7 570 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 ADAM28Q9UKQ2 775 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 HDCP19113 662 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 RHDQ02161 417 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 AGKQ53H12 422 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 PPP1R26Q5T8A7 1209 aaPredicted RBP13.91□□□□□ -0.18
SYNE3-201ENST00000334258 NCBP2-AS2Q69YL0 99 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 CCDC185Q8N715 623 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 VPS39Q96JC1 886 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 VTI1BQ9UEU0 232 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 VANGL2Q9ULK5 521 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 RABL2BQ9UNT1 228 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 DOCK5Q9H7D0 1870 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 TMX2-CTNND1H3BSU7 103 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 PORP16435 677 aaPredicted RBP13.91□□□□□ -0.18
SYNE3-201ENST00000334258 TPH1P17752 444 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 MAPK10P53779 464 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 TUBA4AP68366 448 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 ITGA7Q13683 1181 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 KIZQ2M2Z5 673 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 ZNF362Q5T0B9 420 aaPredicted RBP13.91□□□□□ -0.18
SYNE3-201ENST00000334258 IER5Q5VY09 327 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 RNF169Q8NCN4 708 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 KCTD4Q8WVF5 259 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 VPS50Q96JG6 964 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 UPF3AQ9H1J1 476 aaKnown RBP13.91□□□□□ -0.18
SYNE3-201ENST00000334258 CDT1Q9H211 546 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 CXorf21Q9HAI6 301 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 CYP3A43Q9HB55 503 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 MRPL40Q9NQ50 206 aaKnown RBP13.91□□□□□ -0.18
SYNE3-201ENST00000334258 C19orf81C9J6K1 198 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 SLCO1B7G3V0H7 640 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 TIMM44O43615 452 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 MFSD11O43934 449 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 MAFO75444 373 aaPredicted RBP13.91□□□□□ -0.18
SYNE3-201ENST00000334258 DDHD2O94830 711 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 LCP1P13796 627 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 STX5Q13190 355 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 MXD4Q14582 209 aaPredicted RBP13.91□□□□□ -0.18
SYNE3-201ENST00000334258 DPYSL2Q16555 572 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 FAM160B1Q5W0V3 765 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 CPSF7Q8N684 471 aaKnown RBP13.91□□□□□ -0.18
SYNE3-201ENST00000334258 HM13Q8TCT9 377 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 CYGBQ8WWM9 190 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 RANBP9Q96S59 729 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 ITM2BQ9Y287 266 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 CROCCQ5TZA2 2017 aa13.91□□□□□ -0.18
SYNE3-201ENST00000334258 C9IYK1 514 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 ZBTB11O95625 1053 aaPredicted RBP13.9□□□□□ -0.18
SYNE3-201ENST00000334258 STAG3L1P0CL83 205 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 ADSLP30566 484 aaPredicted RBP13.9□□□□□ -0.18
SYNE3-201ENST00000334258 IREB2P48200 963 aaKnown RBP13.9□□□□□ -0.18
SYNE3-201ENST00000334258 ZBED5Q49AG3 693 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 GPR180Q86V85 440 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 CLEC4CQ8WTT0 213 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 TRAPPC12Q8WVT3 735 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 FAM149B1Q96BN6 582 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 PRDM12Q9H4Q4 367 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 COQ6Q9Y2Z9 468 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 SPO11Q9Y5K1 396 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 BRCA1P38398 1863 aaKnown RBP13.9□□□□□ -0.18
SYNE3-201ENST00000334258 A0A1W2PPW3 197 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 CABYRO75952 493 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 TOMM70O94826 608 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 IL18RAPO95256 599 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 MT-CO1P00395 513 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 APOA4P06727 396 aa13.9□□□□□ -0.18
SYNE3-201ENST00000334258 GNAO1P09471 354 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms