RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 HOMER2Q9NSB8 354 aa8.92□□□□□ -0.98
CPNE8-201ENST00000331366 STAP1Q9ULZ2 295 aa8.92□□□□□ -0.98
CPNE8-201ENST00000331366 FAM92AA1XBS5 289 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 DDHD2O94830 711 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 HARSP12081 509 aaKnown RBP8.91□□□□□ -0.98
CPNE8-201ENST00000331366 NPR3P17342 541 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 CDH17Q12864 832 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 R3HDM1Q15032 1099 aaKnown RBP8.91□□□□□ -0.98
CPNE8-201ENST00000331366 SLC9B1Q4ZJI4 515 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 CYHR1Q6ZMK1 362 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 ZC3H18Q86VM9 953 aaKnown RBP8.91□□□□□ -0.98
CPNE8-201ENST00000331366 LILRA2Q8N149 483 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 UBE2OQ9C0C9 1292 aaKnown RBP8.91□□□□□ -0.98
CPNE8-201ENST00000331366 AAR2Q9Y312 384 aaKnown RBP8.91□□□□□ -0.98
CPNE8-201ENST00000331366 ANAPC1Q9H1A4 1944 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 COL4A2P08572 1712 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 SERTM1A2A2V5 107 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 DLGAP1O14490 977 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 MRPS14O60783 128 aaKnown RBP8.91□□□□□ -0.98
CPNE8-201ENST00000331366 DARSP14868 501 aaKnown RBP8.91□□□□□ -0.98
CPNE8-201ENST00000331366 PEX2P28328 305 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 SERPINB6P35237 376 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 ARL4AP40617 200 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 DPP6P42658 865 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 BNIP2Q12982 314 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 CEACAM7Q14002 265 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 CRY1Q16526 586 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 LY6KQ17RY6 165 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 DUSP28Q4G0W2 176 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 OR6B2Q6IFH4 312 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 LARP4Q71RC2 724 aaKnown RBP eCLIP8.91□□□□□ -0.98
CPNE8-201ENST00000331366 RASSF3Q86WH2 238 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 PHTF2Q8N3S3 785 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 ZNF781Q8N8C0 355 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 LEMD2Q8NC56 503 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 ISG20Q96AZ6 181 aaKnown RBP8.91□□□□□ -0.98
CPNE8-201ENST00000331366 GBP5Q96PP8 586 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 PNPOQ9NVS9 261 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 ASIC5Q9NY37 505 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 VANGL2Q9ULK5 521 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 PLXNB3Q9ULL4 1909 aa8.91□□□□□ -0.98
CPNE8-201ENST00000331366 VPS4BO75351 444 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 ME2P23368 584 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 MGAT1P26572 445 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 DCKP27707 260 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 GJC1P36383 396 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 ZFP36L2P47974 494 aaKnown RBP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 DLG1Q12959 904 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 TRIM25Q14258 630 aaKnown RBP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 HSP90AA5PQ58FG0 334 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 SEL1L3Q68CR1 1132 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 IQSEC1Q6DN90 963 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 LRRC8EQ6NSJ5 796 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 NOTUMQ6P988 496 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 C1orf228Q6PIY5 440 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 KDELC1Q6UW63 502 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 RANBP10Q6VN20 620 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 ZBTB33Q86T24 672 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 SLC22A9Q8IVM8 553 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 ARHGAP12Q8IWW6 846 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 TDRD5Q8NAT2 981 aaKnown RBP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 ICA1LQ8NDH6 482 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 SPATA33Q96N06 139 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 TRIM4Q9C037 500 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 DUS2Q9NX74 493 aaKnown RBP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 DTNAQ9Y4J8 743 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 KAT6AQ92794 2004 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 GOLGA8RI6L899 631 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 MMP3P08254 477 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 UMPSP11172 480 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 INSRRP14616 1297 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 RAG1P15918 1043 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 GOT1P17174 413 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 TFE3P19532 575 aaPredicted RBP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 GABRB3P28472 473 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 RANBP1P43487 201 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 CLCN5P51795 746 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 DYNLT1P63172 113 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 MPP3Q13368 585 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 ITGA7Q13683 1181 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 LAMB3Q13751 1172 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 TTLL12Q14166 644 aaPredicted RBP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 PPP2R5DQ14738 602 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 ACAP2Q15057 778 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 LSM12Q3MHD2 195 aaKnown RBP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 KLC3Q6P597 504 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 ZNF354CQ86Y25 554 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 FAM81AQ8TBF8 368 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 JDP2Q8WYK2 163 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 TFAP2CQ92754 450 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 LENG1Q96BZ8 264 aaPredicted RBP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 CCDC115Q96NT0 180 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 HOPXQ9BPY8 73 aaPredicted RBP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 BRINP2Q9C0B6 783 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 RNPEPQ9H4A4 650 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 CHST12Q9NRB3 414 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 CCM2LQ9NUG4 571 aaPredicted RBP8.9□□□□□ -0.98
CPNE8-201ENST00000331366 PCSK1NQ9UHG2 260 aa8.9□□□□□ -0.98
CPNE8-201ENST00000331366 GNEQ9Y223 722 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms