RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 HSPA13P48723 471 aa8□□□□□ -1.13
VMA21-201ENST00000330374 CDK9P50750 372 aaKnown RBP8□□□□□ -1.13
VMA21-201ENST00000330374 NEDD8Q15843 81 aa8□□□□□ -1.13
VMA21-201ENST00000330374 SWI5Q1ZZU3 235 aa8□□□□□ -1.13
VMA21-201ENST00000330374 SOWAHAQ2M3V2 549 aa8□□□□□ -1.13
VMA21-201ENST00000330374 MAP7D1Q3KQU3 841 aa8□□□□□ -1.13
VMA21-201ENST00000330374 GRTP1Q5TC63 336 aa8□□□□□ -1.13
VMA21-201ENST00000330374 ZNF280DQ6N043 979 aa8□□□□□ -1.13
VMA21-201ENST00000330374 C16orf87Q6PH81 154 aa8□□□□□ -1.13
VMA21-201ENST00000330374 TICAM1Q8IUC6 712 aa8□□□□□ -1.13
VMA21-201ENST00000330374 SLC41A1Q8IVJ1 513 aa8□□□□□ -1.13
VMA21-201ENST00000330374 CHERPQ8IWX8 916 aaKnown RBP8□□□□□ -1.13
VMA21-201ENST00000330374 SMYD1Q8NB12 490 aa8□□□□□ -1.13
VMA21-201ENST00000330374 USP33Q8TEY7 942 aa8□□□□□ -1.13
VMA21-201ENST00000330374 C12orf43Q96C57 262 aaKnown RBP8□□□□□ -1.13
VMA21-201ENST00000330374 VPS39Q96JC1 886 aa8□□□□□ -1.13
VMA21-201ENST00000330374 TBCBQ99426 244 aa8□□□□□ -1.13
VMA21-201ENST00000330374 SPON2Q9BUD6 331 aa8□□□□□ -1.13
VMA21-201ENST00000330374 SOX17Q9H6I2 414 aaPredicted RBP8□□□□□ -1.13
VMA21-201ENST00000330374 PLK2Q9NYY3 685 aa8□□□□□ -1.13
VMA21-201ENST00000330374 VANGL2Q9ULK5 521 aa8□□□□□ -1.13
VMA21-201ENST00000330374 RAP2CQ9Y3L5 183 aa8□□□□□ -1.13
VMA21-201ENST00000330374 RNF103-CHMP3A0A140T963 221 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 A0A1W2PPW3 197 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 ALDH1A2O94788 518 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 IQCF3P0C7M6 154 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 CCDC130P13994 396 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 GRIA3P42263 894 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 MAGEA6P43360 314 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 RABGGTBP53611 331 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 RPL26P61254 145 aaKnown RBP7.99□□□□□ -1.13
VMA21-201ENST00000330374 PPP1R3AQ16821 1122 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 KIZQ2M2Z5 673 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 PRPF38BQ5VTL8 546 aaKnown RBP7.99□□□□□ -1.13
VMA21-201ENST00000330374 SPACA7Q96KW9 195 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 MRPL45Q9BRJ2 306 aaKnown RBP7.99□□□□□ -1.13
VMA21-201ENST00000330374 OSBPL6Q9BZF3 934 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 ACAD9Q9H845 621 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 OLAHQ9NV23 265 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 EGFL7Q9UHF1 273 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 BARX2Q9UMQ3 279 aaPredicted RBP7.99□□□□□ -1.13
VMA21-201ENST00000330374 TCAF2A6NFQ2 919 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 TRIM38O00635 465 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 SOCS2O14508 198 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 MT-ND1P03886 318 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 GNL1P36915 607 aaPredicted RBP7.99□□□□□ -1.13
VMA21-201ENST00000330374 MAGEA8P43361 318 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 LIMK2P53671 638 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 INSCQ1MX18 579 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 STXBP5Q5T5C0 1151 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 STEAP4Q687X5 459 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 GRAMD4Q6IC98 578 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 KCNMB4Q86W47 210 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 LZICQ8WZA0 190 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 NAA50Q9GZZ1 169 aaKnown RBP7.99□□□□□ -1.13
VMA21-201ENST00000330374 DPEP3Q9H4B8 488 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 AASDHPPTQ9NRN7 309 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 OXSMQ9NWU1 459 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 MAP3K20Q9NYL2 800 aaKnown RBP7.99□□□□□ -1.13
VMA21-201ENST00000330374 BFARQ9NZS9 450 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 XPR1Q9UBH6 696 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 MORF4L1Q9UBU8 362 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 H3BNH8 94 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 ACOT8O14734 319 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 PPEF2O14830 753 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 B4GALT4O60513 344 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 MAFO75444 373 aaPredicted RBP7.99□□□□□ -1.13
VMA21-201ENST00000330374 GPC4O75487 556 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 CD46P15529 392 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 METTL21CQ5VZV1 264 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 IFNEQ86WN2 208 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 FIBCD1Q8N539 461 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 ZBTB8BQ8NAP8 495 aaPredicted RBP7.99□□□□□ -1.13
VMA21-201ENST00000330374 KHSRPQ92945 711 aaKnown RBP eCLIP7.99□□□□□ -1.136e-7■■■□□ 15.1
VMA21-201ENST00000330374 ISOC1Q96CN7 298 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 GJD4Q96KN9 370 aaPredicted RBP7.99□□□□□ -1.13
VMA21-201ENST00000330374 CXCL16Q9H2A7 254 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 PLGRKTQ9HBL7 147 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 ZBTB26Q9HCK0 441 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 PCDHGA4Q9Y5G9 962 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 LRRC37AA6NMS7 1700 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 ANKRD31Q8N7Z5 1873 aa7.99□□□□□ -1.13
VMA21-201ENST00000330374 GABBR2O75899 941 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 BNIP3Q12983 259 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CTBP1Q13363 440 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 HSDL1Q3SXM5 330 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 DCAF6Q58WW2 860 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 XRRA1Q6P2D8 792 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 LRRC43Q8N309 656 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 NAT16Q8N8M0 369 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 ZNF214Q9UL59 606 aaPredicted RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 PCDHGA10Q9Y5H3 936 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 PRORSD1PA6NEY8 169 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 BTBD19C9JJ37 291 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CITO14578 2027 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 HTRA2O43464 458 aaPredicted RBP7.98□□□□□ -1.13
VMA21-201ENST00000330374 ATE1O95260 518 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 CTBSQ01459 385 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 SULT2A1Q06520 285 aa7.98□□□□□ -1.13
VMA21-201ENST00000330374 TRIM25Q14258 630 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms