RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 CLDN2P57739 230 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 HNRNPKP61978 463 aaKnown RBP eCLIP23.77■■□□□ 1.4
TMEM54-201ENST00000329151 RTP5Q14D33 572 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 POLD3Q15054 466 aaPredicted RBP23.77■■□□□ 1.4
TMEM54-201ENST00000329151 CDO1Q16878 200 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 SEL1L3Q68CR1 1132 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 KDM7AQ6ZMT4 941 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 Q6ZSR6 202 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 NOP9Q86U38 636 aaKnown RBP23.77■■□□□ 1.4
TMEM54-201ENST00000329151 ZSCAN30Q86W11 494 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 ZNF354CQ86Y25 554 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 IFT43Q96FT9 208 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 SLC17A9Q9BYT1 436 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 ABCG4Q9H172 646 aa23.77■■□□□ 1.4
TMEM54-201ENST00000329151 F8VZ95 297 aa23.76■■□□□ 1.39
TMEM54-201ENST00000329151 I6L893 689 aaPredicted RBP23.76■■□□□ 1.39
TMEM54-201ENST00000329151 PIAS2O75928 621 aa23.76■■□□□ 1.39
TMEM54-201ENST00000329151 L1CAMP32004 1257 aa23.76■■□□□ 1.39
TMEM54-201ENST00000329151 CCNHP51946 323 aaPredicted RBP23.76■■□□□ 1.39
TMEM54-201ENST00000329151 INSM1Q01101 510 aaPredicted RBP23.76■■□□□ 1.39
TMEM54-201ENST00000329151 SLC25A45Q8N413 288 aa23.76■■□□□ 1.39
TMEM54-201ENST00000329151 DUSP23Q9BVJ7 150 aa23.76■■□□□ 1.39
TMEM54-201ENST00000329151 PPARGC1AQ9UBK2 798 aaKnown RBP23.76■■□□□ 1.39
TMEM54-201ENST00000329151 FCF1Q9Y324 198 aaKnown RBP23.76■■□□□ 1.39
TMEM54-201ENST00000329151 HS3ST3A1Q9Y663 406 aa23.76■■□□□ 1.39
TMEM54-201ENST00000329151 WASF2Q9Y6W5 498 aa23.76■■□□□ 1.39
TMEM54-201ENST00000329151 MT-CO3P00414 261 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 EIF2S3P41091 472 aaKnown RBP23.75■■□□□ 1.39
TMEM54-201ENST00000329151 NOMO3P69849 1222 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 FKBP15Q5T1M5 1219 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 GCNT7Q6ZNI0 430 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 ARCQ7LC44 396 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 CACTIN-AS1Q8N1I8 211 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 EMC1Q8N766 993 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 EPS8L1Q8TE68 723 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 RFFLQ8WZ73 363 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 FGF11Q92914 225 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 TM6SF2Q9BZW4 377 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 UCKL1Q9NWZ5 548 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 NLGN3Q9NZ94 848 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 OR12D3Q9UGF7 316 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 TMEM59LQ9UK28 342 aa23.75■■□□□ 1.39
TMEM54-201ENST00000329151 ZFR2Q9UPR6 939 aaKnown RBP23.75■■□□□ 1.39
TMEM54-201ENST00000329151 FPGTO14772 594 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 GFPT2O94808 682 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 RABIFP47224 123 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 SYCP1Q15431 976 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 TMEM259Q4ZIN3 620 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 TCP11X2Q5H9J9 407 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 KYAT3Q6YP21 454 aaKnown RBP23.74■■□□□ 1.39
TMEM54-201ENST00000329151 ABI3BPQ7Z7G0 1075 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 RAB7BQ96AH8 199 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 ARHGEF26Q96DR7 871 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 DEPDC7Q96QD5 511 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 UBL7Q96S82 380 aaPredicted RBP23.74■■□□□ 1.39
TMEM54-201ENST00000329151 RETREG1Q9H6L5 497 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 USP29Q9HBJ7 922 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 SAMSN1Q9NSI8 373 aaKnown RBP23.74■■□□□ 1.39
TMEM54-201ENST00000329151 TAB2Q9NYJ8 693 aa23.74■■□□□ 1.39
TMEM54-201ENST00000329151 BRINP1O60477 761 aa23.73■■□□□ 1.39
TMEM54-201ENST00000329151 PAK4O96013 591 aaPredicted RBP23.73■■□□□ 1.39
TMEM54-201ENST00000329151 CKMT1AP12532 417 aa23.73■■□□□ 1.39
TMEM54-201ENST00000329151 MAPKAPK2P49137 400 aa23.73■■□□□ 1.39
TMEM54-201ENST00000329151 SNRPD1P62314 119 aaKnown RBP23.73■■□□□ 1.39
TMEM54-201ENST00000329151 ARF5P84085 180 aa23.73■■□□□ 1.39
TMEM54-201ENST00000329151 ZNF542PQ5EBM4 170 aa23.73■■□□□ 1.39
TMEM54-201ENST00000329151 CT47A1Q5JQC4 288 aaPredicted RBP23.73■■□□□ 1.39
TMEM54-201ENST00000329151 DCBLD1Q8N8Z6 715 aa23.73■■□□□ 1.39
TMEM54-201ENST00000329151 ISG20Q96AZ6 181 aaKnown RBP23.73■■□□□ 1.39
TMEM54-201ENST00000329151 PCMTD1Q96MG8 357 aaPredicted RBP23.73■■□□□ 1.39
TMEM54-201ENST00000329151 NAA15Q9BXJ9 866 aaKnown RBP23.73■■□□□ 1.39
TMEM54-201ENST00000329151 DNAI1Q9UI46 699 aa23.73■■□□□ 1.39
TMEM54-201ENST00000329151 FADS3Q9Y5Q0 445 aa23.73■■□□□ 1.39
TMEM54-201ENST00000329151 PTPRQQ9UMZ3 2332 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 KRIT1O00522 736 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 TSPAN6O43657 245 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 TLX3O43711 291 aaPredicted RBP23.72■■□□□ 1.39
TMEM54-201ENST00000329151 AP1G1O43747 822 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 ZMPSTE24O75844 475 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 RHOQP17081 205 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 ITPKBP27987 946 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 CDR2Q01850 454 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 RAD51Q06609 339 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 TRIM72Q6ZMU5 477 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 PARS2Q7L3T8 475 aaKnown RBP23.72■■□□□ 1.39
TMEM54-201ENST00000329151 PARGQ86W56 976 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 RXFP2Q8WXD0 754 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 TBC1D31Q96DN5 1066 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 CRELD1Q96HD1 420 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 APOLD1Q96LR9 279 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 C11orf70Q9BRQ4 267 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 NCKIPSDQ9NZQ3 722 aa23.72■■□□□ 1.39
TMEM54-201ENST00000329151 ANKRD62A6NC57 917 aa23.71■■□□□ 1.39
TMEM54-201ENST00000329151 SCAMP1O15126 338 aa23.71■■□□□ 1.39
TMEM54-201ENST00000329151 RAMP2O60895 175 aa23.71■■□□□ 1.39
TMEM54-201ENST00000329151 ADRA1BP35368 520 aa23.71■■□□□ 1.39
TMEM54-201ENST00000329151 NSFP46459 744 aaKnown RBP23.71■■□□□ 1.39
TMEM54-201ENST00000329151 THOP1P52888 689 aa23.71■■□□□ 1.39
TMEM54-201ENST00000329151 C15orf59Q2T9L4 293 aaPredicted RBP23.71■■□□□ 1.39
TMEM54-201ENST00000329151 TRNP1Q6NT89 227 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms