RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 DDHD2O94830 711 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 F9P00740 461 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 HNRNPLP14866 589 aaKnown RBP eCLIP14.25□□□□□ -0.134e-6■■■■□ 19.8
ATP2C1-201ENST00000328560 ALOX15P16050 662 aaPredicted RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 PAPOLAP51003 745 aaKnown RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 ITKQ08881 620 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 ART3Q13508 389 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 XKR4Q5GH76 650 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 RPS27LQ71UM5 84 aaKnown RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 NDNQ99608 321 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 RHOJQ9H4E5 214 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 PLXNA1Q9UIW2 1896 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 TMEM114B3SHH9 223 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 MATN2O00339 956 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 MT-CO1P00395 513 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 LRPAP1P30533 357 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 MAGEA12P43365 314 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 CYLC2Q14093 348 aaPredicted RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 TIGD5Q53EQ6 642 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 ZNF470Q6ECI4 717 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 BNIPLQ7Z465 357 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 LIMS2Q7Z4I7 341 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 CLEC14AQ86T13 490 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 CEP97Q8IW35 865 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 DSELQ8IZU8 1212 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 KYQ8NBH2 561 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 FAM156AQ8NDB6 213 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 DQX1Q8TE96 717 aaKnown RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 SMARCD1Q96GM5 515 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 NR1H4Q96RI1 486 aaPredicted RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 TBL1YQ9BQ87 522 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 PDP2Q9P2J9 529 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 MID2Q9UJV3 735 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 CDYLQ9Y232 598 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 FAM95CA0A1B0GW59 222 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 SLC35E2BP0CK96 405 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 FLOT2Q14254 428 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 GSTA3Q16772 222 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 TAF2Q6P1X5 1199 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 ZYG11AQ6WRX3 759 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 PDSS2Q86YH6 399 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 SNX31Q8N9S9 440 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 JADE3Q92613 823 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 GPR22Q99680 433 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 RTKNQ9BST9 563 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 VCX3BQ9H321 246 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 SUDS3Q9H7L9 328 aaPredicted RBP14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 FAM105AQ9NUU6 356 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 MPP6Q9NZW5 540 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 DNAJB4Q9UDY4 337 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 GNEQ9Y223 722 aaKnown RBP14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 DLX3O60479 287 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 ARSAP15289 507 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 STMN1P16949 149 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 THOP1P52888 689 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 SLC12A1Q13621 1099 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 CSHL1Q14406 222 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 FAM219BQ5XKK7 198 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 TMEM209Q96SK2 561 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 PTPN18Q99952 460 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 TRIM4Q9C037 500 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 RBM22Q9NW64 420 aaKnown RBP eCLIP14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 RGSL1A5PLK6 1076 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 VCLP18206 1134 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 RGS2P41220 211 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 CXCR3P49682 368 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 ZNF157P51786 506 aaPredicted RBP14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 MTTPP55157 894 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 SCAPQ12770 1279 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 LRRC8EQ6NSJ5 796 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 PKN3Q6P5Z2 889 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 ICA1LQ8NDH6 482 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 ZSCAN18Q8TBC5 510 aaPredicted RBP14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 TSPAN18Q96SJ8 248 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 NPAS2Q99743 824 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 DRC3Q9H069 523 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 NDFIP2Q9NV92 336 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 ASB3Q9Y575 518 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 AK5Q9Y6K8 562 aa14.24□□□□□ -0.13
ATP2C1-201ENST00000328560 AURKAO14965 403 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 CABYRO75952 493 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 XRCC1P18887 633 aaPredicted RBP14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 TAS2R39P59534 338 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 PRKAA1Q13131 559 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 PCID2Q5JVF3 399 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 SH2D4BQ5SQS7 431 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 BNC2Q6ZN30 1099 aaPredicted RBP14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 LINC00523Q86TU6 105 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 METTL23Q86XA0 190 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 CENPLQ8N0S6 344 aaPredicted RBP14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 PPHLN1Q8NEY8 458 aaKnown RBP14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 VAT1Q99536 393 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 SERPINI1Q99574 410 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 TRPV6Q9H1D0 765 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 NOD1Q9Y239 953 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 DTNAQ9Y4J8 743 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 CCL22O00626 93 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 GRID2O43424 1007 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 PGK1P00558 417 aa14.23□□□□□ -0.13
ATP2C1-201ENST00000328560 SBK3P0C264 359 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms