RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SLC25A51Q9H1U9 297 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 GTSE1Q9NYZ3 720 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 DEC1Q9P2X7 70 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 TTLL3Q9Y4R7 772 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 TCRBV7S3A2A0A539 114 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 GOLGA6CA6NDK9 693 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 GOLGA6BA6NDN3 693 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 ERI2A8K979 691 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 ANXA9O76027 345 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 APRTP07741 180 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 GOLGA6DP0CG33 693 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 OPRD1P41143 372 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 EIF2DP41214 584 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 CDK16Q00536 496 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 GEN1Q17RS7 908 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 AAK1Q2M2I8 961 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 MBLAC2Q68D91 279 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 EMBQ6PCB8 327 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 PHTF2Q8N3S3 785 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 ANKRD7Q92527 254 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 IMP4Q96G21 291 aaKnown RBP10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 MLPHQ9BV36 600 aaPredicted RBP10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 GOLGA6AQ9NYA3 693 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 LHX3Q9UBR4 397 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 SLC25A13Q9UJS0 675 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 HS3ST2Q9Y278 367 aa10.41□□□□□ -0.74
VIPAS39-201ENST00000327028 MUC22E2RYF6 1773 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 MUSKO15146 869 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 TRIM24O15164 1050 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 PSMD3O43242 534 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 POLR2EP19388 210 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 CTSOP43234 321 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 SLC6A11P48066 632 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 GEMP55040 296 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 SLC14A2Q15849 920 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 KCTD11Q693B1 232 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 PPP1R21Q6ZMI0 780 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 TSEN2Q8NCE0 465 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 MCUQ8NE86 351 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 MAFAQ8NHW3 353 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 TTC8Q8TAM2 541 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 CSGALNACT1Q8TDX6 532 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 HNRNPLLQ8WVV9 542 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 OXNAD1Q96HP4 312 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 FRMD8Q9BZ67 464 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 KCNK12Q9HB15 430 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 TRPV5Q9NQA5 729 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 AAR2Q9Y312 384 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 C5orf42Q9H799 3197 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 AP2A1O95782 977 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 MT-CO1P00395 513 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 ASLP04424 464 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 FAM153BP0C7A2 387 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 LMAN1P49257 510 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 VASPP50552 380 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 MAXP61244 160 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 ECT2LQ008S8 904 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 DSC2Q02487 901 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 KDSRQ06136 332 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 ITKQ08881 620 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 NIPAL4Q0D2K0 466 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 FAM153CQ494X1 144 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 TMEM215Q68D42 235 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 FBXO38Q6PIJ6 1188 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 CEP128Q6ZU80 1094 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 ARRDC2Q8TBH0 407 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 CAVIN3Q969G5 261 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 TADA1Q96BN2 335 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 CHFRQ96EP1 664 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 PHACTR1Q9C0D0 580 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 TSPYL1Q9H0U9 437 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 LRRC40Q9H9A6 602 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 FAM153AQ9UHL3 310 aa10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 FCF1Q9Y324 198 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-201ENST00000327028 SUN1O94901 812 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 MMP2P08253 660 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 SRCP12931 536 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 CR2P20023 1033 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 CES1P23141 567 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 STK19P49842 368 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 RHOAP61586 193 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 MPP3Q13368 585 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 EIF4HQ15056 248 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 PREPLQ4J6C6 727 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 RALGPS1Q5JS13 557 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 SYCP2LQ5T4T6 812 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 PRPF39Q86UA1 669 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 SH2D3CQ8N5H7 860 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 PDCD7Q8N8D1 485 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 TERB1Q8NA31 727 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 SPATA22Q8NHS9 363 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 DNASE1L2Q92874 299 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 NUDCD1Q96RS6 583 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 SEMA3CQ99985 751 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 CEP44Q9C0F1 390 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 VPS45Q9NRW7 570 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 GOLGA8MH3BSY2 632 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 PPFIA2O75334 1257 aa10.39□□□□□ -0.75
VIPAS39-201ENST00000327028 CD86P42081 329 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms