RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 RP1L1Q8IWN7 2480 aaPredicted RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 NYNRINQ9P2P1 1898 aaKnown RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 ACANP16112 2415 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 DYNC1I1O14576 645 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 IFNA2P01563 188 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 CSF2P04141 144 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 EDN3P14138 238 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 PROZP22891 400 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 CYP2F1P24903 491 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 PCSK6P29122 969 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 CDK18Q07002 472 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 TRA2AQ13595 282 aaKnown RBP eCLIP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 TPD52L1Q16890 204 aaPredicted RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 SMYD4Q8IYR2 804 aaPredicted RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 CCDC170Q8IYT3 715 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 SEC14L1Q92503 715 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 MBD6Q96DN6 1003 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 C19orf60Q96EN9 201 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 OMDQ99983 421 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 FOXP3Q9BZS1 431 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 NEUROG2Q9H2A3 272 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 TMEM134Q9H6X4 195 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 ARHGAP20Q9P2F6 1191 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 LARSQ9P2J5 1176 aaKnown RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 NAALADL1Q9UQQ1 740 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 ZNF510Q9Y2H8 683 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 LOC101059948A0A1B0GTJ6 334 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ARHGEF35A5YM69 484 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 A6NCN8 305 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 TGFB1I1O43294 461 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 GFPT2O94808 682 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ADH1BP00325 375 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 GYPCP04921 128 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 TPM1P09493 284 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 PNLIPP16233 465 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 GTF2H1P32780 548 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ZBED6P86452 979 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 CST6Q15828 149 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 INTS6LQ5JSJ4 861 aaKnown RBP6.83□□□□□ -1.32
CSTF3-201ENST00000323959 HECTD3Q5T447 861 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ISM2Q6H9L7 571 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 C4orf50Q6ZRC1 276 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 DENND5BQ6ZUT9 1274 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ZNF438Q7Z4V0 828 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 SFR1Q86XK3 245 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 SPATA2LQ8IUW3 424 aaPredicted RBP6.83□□□□□ -1.32
CSTF3-201ENST00000323959 CCAR2Q8N163 923 aaKnown RBP6.83□□□□□ -1.32
CSTF3-201ENST00000323959 CEP120Q8N960 986 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ACO2Q99798 780 aaKnown RBP6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ZPBPQ9BS86 351 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 SLC39A2Q9NP94 309 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 RGL1Q9NZL6 768 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 MYO1AQ9UBC5 1043 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 SPASTQ9UBP0 616 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 CYB561D2O14569 222 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 CETN3O15182 167 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ZSCAN12O43309 604 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 KRT86O43790 486 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 FAM13AO94988 1023 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ADAM8P78325 824 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 CLDN10P78369 228 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 KRT83P78385 493 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 CTTNQ14247 550 aaKnown RBP6.83□□□□□ -1.32
CSTF3-201ENST00000323959 SYCP1Q15431 976 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ENOX2Q16206 610 aaKnown RBP6.83□□□□□ -1.32
CSTF3-201ENST00000323959 MPZL3Q6UWV2 235 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 CCDC74AQ96AQ1 378 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 MRPL4Q9BYD3 311 aaKnown RBP6.83□□□□□ -1.32
CSTF3-201ENST00000323959 SPRY4Q9C004 299 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 NDST4Q9H3R1 872 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 ZNHIT6Q9NWK9 470 aaKnown RBP6.83□□□□□ -1.32
CSTF3-201ENST00000323959 EXOC7Q9UPT5 735 aa6.83□□□□□ -1.32
CSTF3-201ENST00000323959 TRIM49BA6NDI0 452 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 E2F3O00716 465 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 GREM1O60565 184 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 CEACAM4O75871 244 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 SKILP12757 684 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 GARTP22102 1010 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 TUBB2AQ13885 445 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 FKBP15Q5T1M5 1219 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 TDRD10Q5VZ19 366 aaKnown RBP6.82□□□□□ -1.32
CSTF3-201ENST00000323959 DYMQ7RTS9 669 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 LYSMD3Q7Z3D4 306 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 CAMKMTQ7Z624 323 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 SCN4BQ8IWT1 228 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 TPH2Q8IWU9 490 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 ARL10Q8N8L6 244 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 SIMC1Q8NDZ2 872 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 GJA10Q969M2 543 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 FAXDC2Q96IV6 333 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 CALR3Q96L12 384 aaKnown RBP6.82□□□□□ -1.32
CSTF3-201ENST00000323959 ACCSQ96QU6 501 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 TUBB2BQ9BVA1 445 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 CPEB1Q9BZB8 566 aaKnown RBP6.82□□□□□ -1.32
CSTF3-201ENST00000323959 ABHD10Q9NUJ1 306 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 COMMD8Q9NX08 183 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 ARHGAP28Q9P2N2 729 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 PILRAQ9UKJ1 303 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 PYCARDQ9ULZ3 195 aa6.82□□□□□ -1.32
CSTF3-201ENST00000323959 DERAQ9Y315 318 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms