RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PROCP04070 461 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 PRKCGP05129 697 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 C2P06681 752 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 ADRA1AP35348 466 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 ETFBP38117 255 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 AQP5P55064 265 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 WNT3AP56704 352 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 IRF9Q00978 393 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 SLC20A2Q08357 652 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 SMARCB1Q12824 385 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 SEPT6Q14141 434 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 FRG1Q14331 258 aaKnown RBP7.68□□□□□ -1.18
IFT88-201ENST00000319980 PCLAFQ15004 111 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 SNCBQ16143 134 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 INSCQ1MX18 579 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 CTC1Q2NKJ3 1217 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 MBLAC2Q68D91 279 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 PDPK2PQ6A1A2 396 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 KIAA1841Q6NSI8 718 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 RANBP10Q6VN20 620 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 RAPH1Q70E73 1250 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 TTC7BQ86TV6 843 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 DENND6AQ8IWF6 608 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 RAB3IL1Q8TBN0 382 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 MYEOVQ96EZ4 313 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 PRR11Q96HE9 360 aaPredicted RBP7.68□□□□□ -1.18
IFT88-201ENST00000319980 SPATA17Q96L03 361 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 ZNF512Q96ME7 567 aaPredicted RBP7.68□□□□□ -1.18
IFT88-201ENST00000319980 NACA2Q9H009 215 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 RNF208Q9H0X6 261 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 COPG2Q9UBF2 871 aa7.68□□□□□ -1.18
IFT88-201ENST00000319980 PPARGC1AQ9UBK2 798 aaKnown RBP7.68□□□□□ -1.18
IFT88-201ENST00000319980 IGLV3-10A0A075B6K4 115 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 RAMP2O60895 175 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 HAUS5O94927 633 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 AHSGP02765 367 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 FGF3P11487 239 aaPredicted RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 CD86P42081 329 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 RASSF2P50749 326 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 GRM3Q14832 879 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 POLD3Q15054 466 aaPredicted RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 SKIV2LQ15477 1246 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 HSF5Q4G112 596 aaPredicted RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 POTEHQ6S545 545 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.67□□□□□ -1.18
IFT88-201ENST00000319980 ALYREFQ86V81 257 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 ZC3HC1Q86WB0 502 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 CFAP52Q8N1V2 620 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 LRRC43Q8N309 656 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 PPHLN1Q8NEY8 458 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 SLC7A6OSQ96CW6 309 aaPredicted RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 TMEM175Q9BSA9 504 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 SLC25A51Q9H1U9 297 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 TMEM51Q9NW97 253 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 KCNK4Q9NYG8 393 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 FNIP2Q9P278 1114 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 ARMCX1Q9P291 453 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 CPSF2Q9P2I0 782 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 SHROOM3Q8TF72 1996 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 PTPRDP23468 1912 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 SLC38A8A6NNN8 435 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 A8MUI8 341 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 PHGDHO43175 533 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 ATP6V1G2O95670 118 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 CPA3P15088 417 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 ARNTP27540 789 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 GABRB3P28472 473 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 SLC1A6P48664 564 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 CSE1LP55060 971 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 DSC2Q02487 901 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 ITGA9Q13797 1035 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 USP10Q14694 798 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 RFWD3Q6PCD5 774 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 NSMCE1Q8WV22 266 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 ISL2Q96A47 359 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 SKA1Q96BD8 255 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 RILPQ96NA2 401 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 PPP1R2P1Q96PQ5 205 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 SEZ6LQ9BYH1 1024 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 NMUR2Q9GZQ4 415 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 LRMDAQ9H2I8 198 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 CD248Q9HCU0 757 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 HBS1LQ9Y450 684 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 TCAF1Q9Y4C2 921 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 LAMA3Q16787 3333 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 DRGXA6NNA5 263 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 IGLV3-27P01718 113 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 MPOP05164 745 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 RALBP11234 206 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 ATP5C1P36542 298 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 ACVRL1P37023 503 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 AVPR1AP37288 418 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 MAGEA12P43365 314 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 MPP1Q00013 466 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 USP41Q3LFD5 358 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 CCDC153Q494R4 210 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 NADSYN1Q6IA69 706 aa7.67□□□□□ -1.18
IFT88-201ENST00000319980 WDR75Q8IWA0 830 aaKnown RBP7.67□□□□□ -1.18
IFT88-201ENST00000319980 PIWIL2Q8TC59 973 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms