RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 ITFG2Q969R8 447 aa8.83□□□□□ -1
USF3-201ENST00000316407 C11orf16Q9NQ32 467 aa8.83□□□□□ -1
USF3-201ENST00000316407 RAPGEFL1Q9UHV5 662 aa8.83□□□□□ -1
USF3-201ENST00000316407 ZSCAN5DPP0CG00 497 aa8.83□□□□□ -1
USF3-201ENST00000316407 PGAM1P18669 254 aa8.83□□□□□ -1
USF3-201ENST00000316407 CA9Q16790 459 aa8.83□□□□□ -1
USF3-201ENST00000316407 ZNF544Q6NX49 715 aa8.83□□□□□ -1
USF3-201ENST00000316407 ARMC6Q6NXE6 501 aa8.83□□□□□ -1
USF3-201ENST00000316407 SCIMPQ6UWF3 145 aa8.83□□□□□ -1
USF3-201ENST00000316407 RBM43Q6ZSC3 357 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 CAB39LQ9H9S4 337 aa8.83□□□□□ -1
USF3-201ENST00000316407 LMTK3Q96Q04 1460 aa8.83□□□□□ -1
USF3-201ENST00000316407 SAMD9Q5K651 1589 aa8.83□□□□□ -1
USF3-201ENST00000316407 H3BMM5 538 aa8.83□□□□□ -1
USF3-201ENST00000316407 PLOD2O00469 737 aa8.83□□□□□ -1
USF3-201ENST00000316407 TXNP10599 105 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 VCLP18206 1134 aa8.83□□□□□ -1
USF3-201ENST00000316407 CDKL1Q00532 357 aa8.83□□□□□ -1
USF3-201ENST00000316407 TTLL9Q3SXZ7 439 aa8.83□□□□□ -1
USF3-201ENST00000316407 TOR1AIP1Q5JTV8 583 aa8.83□□□□□ -1
USF3-201ENST00000316407 GALNT15Q8N3T1 639 aa8.83□□□□□ -1
USF3-201ENST00000316407 PIWIL2Q8TC59 973 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 HOXC10Q9NYD6 342 aa8.83□□□□□ -1
USF3-201ENST00000316407 CDH22Q9UJ99 828 aa8.83□□□□□ -1
USF3-201ENST00000316407 LYNP07948 512 aa8.83□□□□□ -1
USF3-201ENST00000316407 OMPP47874 163 aa8.83□□□□□ -1
USF3-201ENST00000316407 SCUBE3Q8IX30 993 aa8.83□□□□□ -1
USF3-201ENST00000316407 ZCCHC9Q8N567 271 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 FAM13CQ8NE31 585 aa8.83□□□□□ -1
USF3-201ENST00000316407 NXNL1Q96CM4 212 aa8.83□□□□□ -1
USF3-201ENST00000316407 MMP19Q99542 508 aa8.83□□□□□ -1
USF3-201ENST00000316407 ATP7BP35670 1465 aa8.82□□□□□ -1
USF3-201ENST00000316407 CEP170Q5SW79 1584 aa8.82□□□□□ -1
USF3-201ENST00000316407 NCOA3Q9Y6Q9 1424 aa8.82□□□□□ -1
USF3-201ENST00000316407 ANTXR2P58335 489 aa8.82□□□□□ -1
USF3-201ENST00000316407 BNC1Q01954 994 aa8.82□□□□□ -1
USF3-201ENST00000316407 LDHDQ86WU2 507 aa8.82□□□□□ -1
USF3-201ENST00000316407 CDYL2Q8N8U2 506 aa8.82□□□□□ -1
USF3-201ENST00000316407 CERKQ8TCT0 537 aa8.82□□□□□ -1
USF3-201ENST00000316407 UBQLN1Q9UMX0 589 aaKnown RBP8.82□□□□□ -1
USF3-201ENST00000316407 ADGRL3Q9HAR2 1447 aa8.82□□□□□ -1
USF3-201ENST00000316407 ATP6AP2A0A1C7CYW4 349 aa8.82□□□□□ -1
USF3-201ENST00000316407 ATP6AP2O75787 350 aa8.82□□□□□ -1
USF3-201ENST00000316407 GTF2E2P29084 291 aaKnown RBP8.82□□□□□ -1
USF3-201ENST00000316407 GRIA4P48058 902 aa8.82□□□□□ -1
USF3-201ENST00000316407 DDR1Q08345 913 aa8.82□□□□□ -1
USF3-201ENST00000316407 PTCHD4Q6ZW05 846 aa8.82□□□□□ -1
USF3-201ENST00000316407 TRIM48Q8IWZ4 208 aa8.82□□□□□ -1
USF3-201ENST00000316407 COLGALT2Q8IYK4 626 aa8.82□□□□□ -1
USF3-201ENST00000316407 ZNF433Q8N7K0 673 aaPredicted RBP8.82□□□□□ -1
USF3-201ENST00000316407 METTL6Q8TCB7 284 aa8.82□□□□□ -1
USF3-201ENST00000316407 CHCHD6Q9BRQ6 235 aa8.82□□□□□ -1
USF3-201ENST00000316407 HGH1Q9BTY7 390 aa8.82□□□□□ -1
USF3-201ENST00000316407 TARS2Q9BW92 718 aaKnown RBP8.82□□□□□ -1
USF3-201ENST00000316407 CYP27B1O15528 508 aa8.82□□□□□ -1
USF3-201ENST00000316407 HNRNPLP14866 589 aaKnown RBP eCLIP8.82□□□□□ -1
USF3-201ENST00000316407 FMO4P31512 558 aa8.82□□□□□ -1
USF3-201ENST00000316407 S100A3P33764 101 aa8.82□□□□□ -1
USF3-201ENST00000316407 NAMPTP43490 491 aa8.82□□□□□ -1
USF3-201ENST00000316407 CD151P48509 253 aa8.82□□□□□ -1
USF3-201ENST00000316407 PDK2Q15119 407 aa8.82□□□□□ -1
USF3-201ENST00000316407 GAL3ST3Q96A11 431 aa8.82□□□□□ -1
USF3-201ENST00000316407 CEP295NLQ96MC4 621 aa8.82□□□□□ -1
USF3-201ENST00000316407 MND1Q9BWT6 205 aa8.82□□□□□ -1
USF3-201ENST00000316407 CHST7Q9NS84 486 aa8.82□□□□□ -1
USF3-201ENST00000316407 EXD2Q9NVH0 621 aa8.82□□□□□ -1
USF3-201ENST00000316407 ARL8BQ9NVJ2 186 aa8.82□□□□□ -1
USF3-201ENST00000316407 OR14I1A6ND48 311 aa8.82□□□□□ -1
USF3-201ENST00000316407 UGT1A9O60656 530 aa8.82□□□□□ -1
USF3-201ENST00000316407 UGT1A6P19224 532 aa8.82□□□□□ -1
USF3-201ENST00000316407 UGT1A1P22309 533 aa8.82□□□□□ -1
USF3-201ENST00000316407 UGT1A4P22310 534 aa8.82□□□□□ -1
USF3-201ENST00000316407 AQP1P29972 269 aa8.82□□□□□ -1
USF3-201ENST00000316407 UGT1A3P35503 534 aa8.82□□□□□ -1
USF3-201ENST00000316407 UGT1A5P35504 534 aa8.82□□□□□ -1
USF3-201ENST00000316407 TUBA3CQ13748 450 aa8.82□□□□□ -1
USF3-201ENST00000316407 ARHGAP15Q53QZ3 475 aa8.82□□□□□ -1
USF3-201ENST00000316407 PIK3C3Q8NEB9 887 aa8.82□□□□□ -1
USF3-201ENST00000316407 CPB2Q96IY4 423 aa8.82□□□□□ -1
USF3-201ENST00000316407 ZNF350Q9GZX5 532 aa8.82□□□□□ -1
USF3-201ENST00000316407 EBF3Q9H4W6 596 aa8.82□□□□□ -1
USF3-201ENST00000316407 UGT1A7Q9HAW7 530 aa8.82□□□□□ -1
USF3-201ENST00000316407 UGT1A10Q9HAW8 530 aa8.82□□□□□ -1
USF3-201ENST00000316407 UGT1A8Q9HAW9 530 aa8.82□□□□□ -1
USF3-201ENST00000316407 RABL2BQ9UNT1 228 aa8.82□□□□□ -1
USF3-201ENST00000316407 PALLDQ8WX93 1383 aa8.82□□□□□ -1
USF3-201ENST00000316407 KCNK1O00180 336 aa8.82□□□□□ -1
USF3-201ENST00000316407 CYP2C9P11712 490 aa8.82□□□□□ -1
USF3-201ENST00000316407 ZNF549Q6P9A3 640 aa8.82□□□□□ -1
USF3-201ENST00000316407 COL26A1Q96A83 441 aa8.82□□□□□ -1
USF3-201ENST00000316407 TRIM43Q96BQ3 446 aaPredicted RBP8.82□□□□□ -1
USF3-201ENST00000316407 CIDEBQ9UHD4 219 aa8.82□□□□□ -1
USF3-201ENST00000316407 CBX4O00257 560 aa8.82□□□□□ -1
USF3-201ENST00000316407 MID1O15344 667 aa8.82□□□□□ -1
USF3-201ENST00000316407 OR7A10O76100 309 aa8.82□□□□□ -1
USF3-201ENST00000316407 PTPN1P18031 435 aaKnown RBP8.82□□□□□ -1
USF3-201ENST00000316407 AAGABQ6PD74 315 aa8.82□□□□□ -1
USF3-201ENST00000316407 C4orf22Q6V702 233 aa8.82□□□□□ -1
USF3-201ENST00000316407 PQLC1Q8N2U9 271 aa8.82□□□□□ -1
USF3-201ENST00000316407 GRPEL2Q8TAA5 225 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms