RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 TAF12Q16514 161 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 NFE2Q16621 373 aaPredicted RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 TCHHL1Q5QJ38 904 aaPredicted RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 CWF19L1Q69YN2 538 aaKnown RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 FBXL22Q6P050 247 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 ADGRD1Q6QNK2 874 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 RGS9BPQ6ZS82 235 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 SPRED2Q7Z698 418 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 CMC1Q7Z7K0 106 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 RIBC1Q8N443 379 aaPredicted RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 ATPAF2Q8N5M1 289 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 PPFIBP2Q8ND30 876 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 ZSCAN18Q8TBC5 510 aaPredicted RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 SKA1Q96BD8 255 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 VWCEQ96DN2 955 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 EBF3Q9H4W6 596 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 RBM22Q9NW64 420 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 LRCH1Q9Y2L9 728 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 C2orf78A6NCI8 922 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 SDR42E2A6NKP2 422 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 COPEO14579 308 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 RNASEH1O60930 286 aaKnown RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 RPLP2P05387 115 aaKnown RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 PYGLP06737 847 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 BMP1P13497 986 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 ACVRL1P37023 503 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 RPS24P62847 133 aaKnown RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 SLC10A7Q0GE19 358 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 SEMA5AQ13591 1074 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 PTPRRQ15256 657 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 LRRC26Q2I0M4 334 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 C11orf91Q3C1V1 193 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 TEX44Q53QW1 395 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 MS4A13Q5J8X5 152 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 C16orf59Q7L2K0 433 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 DENND1CQ8IV53 801 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 OR52K2Q8NGK3 314 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 ZNF669Q96BR6 464 aaPredicted RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 HMCESQ96FZ2 354 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 GBP5Q96PP8 586 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 SMIM14Q96QK8 99 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 SLC9A7Q96T83 725 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 TRPC7Q9HCX4 862 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 SLC7A8Q9UHI5 535 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 MAFKO60675 156 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 OPHN1O60890 802 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PGM3O95394 542 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 C1QAP02745 245 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 FESP07332 822 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 GLDCP23378 1020 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 OR1E1P30953 314 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 CCNFP41002 786 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 GLUD2P49448 558 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 MLLT6P55198 1093 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 RPL10AP62906 217 aaKnown RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PPIDQ08752 370 aaKnown RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 IKBKEQ14164 716 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PTPRCAPQ14761 206 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 KLHL38Q2WGJ6 581 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ARHGAP12Q8IWW6 846 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 TNS4Q8IZW8 715 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 NDUFAF2Q8N183 169 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SLC44A1Q8WWI5 657 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 WBP2Q969T9 261 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 NTAN1Q96AB6 310 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 DNAJC1Q96KC8 554 aaKnown RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PHF12Q96QT6 1004 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SLC22A12Q96S37 553 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SPON2Q9BUD6 331 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 FOXP3Q9BZS1 431 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 RNF38Q9H0F5 515 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SMOC2Q9H3U7 446 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 NT5MQ9NPB1 228 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PLK2Q9NYY3 685 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SLC2A6Q9UGQ3 507 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 NEU3Q9UQ49 428 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SQORQ9Y6N5 450 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SCN5AQ14524 2016 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PITPNM1O00562 1244 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ITM2AO43736 263 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 GNRH1P01148 92 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ANPEPP15144 967 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 FGFR3P22607 806 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 NMBRP28336 390 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 AVPR1AP37288 418 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PDE1BQ01064 536 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SCAPQ12770 1279 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 GPR17Q13304 367 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PLD1Q13393 1074 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SEPT6Q14141 434 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 BTG3Q14201 252 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ARHGEF6Q15052 776 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 PAOXQ6QHF9 649 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 LDB1Q86U70 411 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SLC26A11Q86WA9 606 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 CHSY1Q86X52 802 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 ULK2Q8IYT8 1036 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 CRIPAKQ8N1N5 446 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 GSDMBQ8TAX9 411 aa7.72□□□□□ -1.17
TRIM55-202ENST00000315962 SLC26A7Q8TE54 656 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms