RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PCSK1NQ9UHG2 260 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 ZFR2Q9UPR6 939 aaKnown RBP14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 BZW2Q9Y6E2 419 aaKnown RBP14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 PLXNA2O75051 1894 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 CEP295Q9C0D2 2601 aa14.86□□□□□ -0.03
PPP1CA-201ENST00000312989 SPAARA0A1B0GVQ0 90 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 H0Y8X5 98 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 KPNA3O00505 521 aaPredicted RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 FGF10O15520 208 aaPredicted RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 GSRP00390 522 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 PRNPP04156 253 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 KCNA4P22459 653 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 HTR7P34969 479 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 PCK1P35558 622 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 YBEYP58557 167 aaPredicted RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 SLC25A11Q02978 314 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 DPYSQ14117 519 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 FGL2Q14314 439 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 ZNF284Q2VY69 593 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TMEM259Q4ZIN3 620 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 ERMARDQ5T6L9 678 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 IL27RAQ6UWB1 636 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 ERN2Q76MJ5 926 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 PARS2Q7L3T8 475 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 SPATS2Q86XZ4 545 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 CPNE8Q86YQ8 564 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 NAXDQ8IW45 347 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TP53INP2Q8IXH6 220 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 NIPA2Q8N8Q9 360 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 OR2AP1Q8NGE2 309 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 OR6K2Q8NGY2 324 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TRIM11Q96F44 468 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 DNAJC7Q99615 494 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 HEPHQ9BQS7 1158 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TMEM121BQ9BXQ6 578 aaPredicted RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TM7SF3Q9NS93 570 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 MYO1AQ9UBC5 1043 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 LHX3Q9UBR4 397 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 PCOLCE2Q9UKZ9 415 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TPX2Q9ULW0 747 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 BTBD3Q9Y2F9 522 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 LUC7L2Q9Y383 392 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 MFHAS1Q9Y4C4 1052 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 PCDHGB2Q9Y5G2 931 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 SCINQ9Y6U3 715 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 ZFHX4Q86UP3 3567 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TBC1D3DA0A087WVF3 549 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TBC1D3IA0A087WXS9 549 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TBC1D3EA0A087X179 549 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TBC1D3KA0A087X1G2 549 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TBC1D3FA6NER0 549 aaPredicted RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 EIF3CLB5ME19 914 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TBC1D3LB9A6J9 549 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TMCC1O94876 653 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 CER1O95813 267 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TBC1D3HP0C7X1 549 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 ITGB7P26010 798 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 MAT2AP31153 395 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 ABL2P42684 1182 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 NXPH1P58417 271 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TPI1P60174 286 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 CYTH1Q15438 398 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 DPYSL2Q16555 572 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 PARP15Q460N3 678 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 INO80DQ53TQ3 878 aaPredicted RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 ATXN7L2Q5T6C5 722 aaPredicted RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 SEL1L3Q68CR1 1132 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TBC1D3GQ6DHY5 549 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TBC1D3CQ6IPX1 549 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 NAPEPLDQ6IQ20 393 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 RFX8Q6ZV50 586 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 PSTKQ8IV42 348 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 VSTM4Q8IW00 320 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TBC1D3Q8IZP1 549 aaPredicted RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 BTBD6Q96KE9 485 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 CCDC114Q96M63 670 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 EIF3CQ99613 913 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 SLC39A8Q9C0K1 460 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TSPY26PQ9H489 355 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 DHX35Q9H5Z1 703 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 CATSPERBQ9H7T0 1116 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 TOR4AQ9NXH8 423 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 CWC15Q9P013 229 aaKnown RBP14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 CA5BQ9Y2D0 317 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 FADS3Q9Y5Q0 445 aa14.85□□□□□ -0.03
PPP1CA-201ENST00000312989 CHD8Q9HCK8 2581 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 A0A1B0GTQ1 180 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 J3KR12 359 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 RNGTTO60942 597 aaKnown RBP14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 DKK1O94907 266 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 ADRB3P13945 408 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 ERCC2P18074 760 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 CD38P28907 300 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 NDST2P52849 883 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 TEAD4Q15561 434 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 NFKBIBQ15653 356 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 PRAMEF14Q5SWL7 426 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 NEK5Q6P3R8 708 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 ALKBH5Q6P6C2 394 aaKnown RBP14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 KANSL1Q7Z3B3 1105 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms