RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 FSTL5Q8N475 847 aaPredicted RBP11.71□□□□□ -0.53
PTPN2-201ENST00000309660 NXNL1Q96CM4 212 aa11.71□□□□□ -0.53
PTPN2-201ENST00000309660 NEMP2A6NFY4 417 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 TADA2AO75478 443 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 SLC4A1P02730 911 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 MGAT3Q09327 533 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 TUBB3Q13509 450 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 ARL13AQ5H913 290 aaPredicted RBP11.71□□□□□ -0.54
PTPN2-201ENST00000309660 STXBP5Q5T5C0 1151 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 CD300LGQ6UXG3 332 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 PTAR1Q7Z6K3 402 aaPredicted RBP11.71□□□□□ -0.54
PTPN2-201ENST00000309660 LMNTD2Q8IXW0 634 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 ILKAPQ9H0C8 392 aaPredicted RBP11.71□□□□□ -0.54
PTPN2-201ENST00000309660 RHOJQ9H4E5 214 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 ACOT9Q9Y305 439 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 PCDHB12Q9Y5F1 795 aa11.71□□□□□ -0.54
PTPN2-201ENST00000309660 J3KR12 359 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CFLARO15519 480 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CD1EP15812 388 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 STMN1P16949 149 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CCNCP24863 283 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 PBX3P40426 434 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CD86P42081 329 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 SLC1A2P43004 574 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CDK7P50613 346 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CSHL1Q14406 222 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 MRPL10Q7Z7H8 261 aaKnown RBP11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CEP97Q8IW35 865 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 EXT2Q93063 718 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 SEPT5Q99719 369 aaPredicted RBP11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CDH19Q9H159 772 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 OSBPL2Q9H1P3 480 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 SP110Q9HB58 689 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 TCF7L2Q9NQB0 619 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 GMIPQ9P107 970 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 PDCD11Q14690 1871 aaKnown RBP11.7□□□□□ -0.54
PTPN2-201ENST00000309660 MATN3O15232 486 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 ZNF623O75123 536 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CNTN5O94779 1100 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 ABL2P42684 1182 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 GEMP55040 296 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CSE1LP55060 971 aaKnown RBP11.7□□□□□ -0.54
PTPN2-201ENST00000309660 WNT3AP56704 352 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 USP46P62068 366 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 TMEM198Q66K66 360 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 FRMD7Q6ZUT3 714 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 RPS27LQ71UM5 84 aaKnown RBP11.7□□□□□ -0.54
PTPN2-201ENST00000309660 TMC7Q7Z402 723 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 MMADHCQ9H3L0 296 aaPredicted RBP11.7□□□□□ -0.54
PTPN2-201ENST00000309660 GTSE1Q9NYZ3 720 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 PLA2G4CQ9UP65 541 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 TMEM233B4DJY2 109 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 MAP3K7O43318 606 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 ZBTB14O43829 449 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 CPB1P15086 417 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 AOC1P19801 751 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 MSX2P35548 267 aaPredicted RBP11.7□□□□□ -0.54
PTPN2-201ENST00000309660 TAS2R39P59534 338 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 SLC10A7Q0GE19 358 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 ASPHQ12797 758 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 IRF5Q13568 498 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 RABGAP1LQ5R372 815 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 RAP1GAP2Q684P5 730 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 RNF148Q8N7C7 305 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 SUSD3Q96L08 255 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 TRIM62Q9BVG3 475 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 ARHGEF38Q9NXL2 777 aa11.7□□□□□ -0.54
PTPN2-201ENST00000309660 NT5C1B-RDH14C9J2C7 533 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 MT-CO1P00395 513 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 PIRTP0C851 137 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 SLC35E2BP0CK96 405 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 HAPLN1P10915 354 aaPredicted RBP11.69□□□□□ -0.54
PTPN2-201ENST00000309660 HARS2P49590 506 aaKnown RBP11.69□□□□□ -0.54
PTPN2-201ENST00000309660 TBX4P57082 545 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 DSC2Q02487 901 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 MGAT5BQ3V5L5 792 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 ALFQ53S48 1182 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 ZNF789Q5FWF6 425 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 BRMS1LQ5PSV4 323 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 PPM1LQ5SGD2 360 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 C10orf120Q5SQS8 335 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 CNSTQ6PJW8 725 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 HPS6Q86YV9 775 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 RYBPQ8N488 228 aaPredicted RBP11.69□□□□□ -0.54
PTPN2-201ENST00000309660 CMTM5Q96DZ9 223 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 HMCESQ96FZ2 354 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 CATSPER2Q96P56 530 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 GPR22Q99680 433 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 KIFC1Q9BW19 673 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 SMOC2Q9H3U7 446 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 YY1AP1Q9H869 796 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 NDE1Q9NXR1 346 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 RPL26L1Q9UNX3 145 aaKnown RBP11.69□□□□□ -0.54
PTPN2-201ENST00000309660 FNDC3AQ9Y2H6 1198 aaKnown RBP11.69□□□□□ -0.54
PTPN2-201ENST00000309660 M0QZQ0 153 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 MAGEC1O60732 1142 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 ADAMTS4O75173 837 aa11.69□□□□□ -0.54
PTPN2-201ENST00000309660 LUC7L3O95232 432 aaKnown RBP11.69□□□□□ -0.54
PTPN2-201ENST00000309660 HNRNPLP14866 589 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTPN2-201ENST00000309660 NUDT2P50583 147 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms