RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ZCWPW2A0A1B0GU75 182 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.07□□□□□ -0.48
TRIM40-205ENST00000307859 NEBLO76041 1014 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 ZWINTO95229 277 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 CXCL14O95715 111 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 MBL2P11226 248 aaPredicted RBP12.07□□□□□ -0.48
TRIM40-205ENST00000307859 CA4P22748 312 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 HOXD9P28356 352 aaPredicted RBP12.07□□□□□ -0.48
TRIM40-205ENST00000307859 GBP2P32456 591 aaPredicted RBP12.07□□□□□ -0.48
TRIM40-205ENST00000307859 RPA3P35244 121 aaPredicted RBP12.07□□□□□ -0.48
TRIM40-205ENST00000307859 CCNFP41002 786 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 CCT5P48643 541 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 ANKRD20A4Q4UJ75 823 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 ARMC3Q5W041 872 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 DENND5AQ6IQ26 1287 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 CCDC149Q6ZUS6 474 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 TMC8Q8IU68 726 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 UNC5BQ8IZJ1 945 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 CFAP52Q8N1V2 620 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRIM40-205ENST00000307859 IPMKQ8NFU5 416 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 NSMCE1Q8WV22 266 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 DYDC1Q8WWB3 177 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 HLA-CQ95604 372 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 WBP2Q969T9 261 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 TADA1Q96BN2 335 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 ZNF669Q96BR6 464 aaPredicted RBP12.07□□□□□ -0.48
TRIM40-205ENST00000307859 MAGEB18Q96M61 343 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 ZNF599Q96NL3 588 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 FCRL3Q96P31 734 aaPredicted RBP12.07□□□□□ -0.48
TRIM40-205ENST00000307859 DDX50Q9BQ39 737 aaKnown RBP12.07□□□□□ -0.48
TRIM40-205ENST00000307859 FICDQ9BVA6 458 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 KIFC1Q9BW19 673 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 MAGEH1Q9H213 219 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 MKS1Q9NXB0 559 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 MTCH2Q9Y6C9 303 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 SLC4A7Q9Y6M7 1214 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 FAM169AQ9Y6X4 670 aa12.07□□□□□ -0.48
TRIM40-205ENST00000307859 A0A1B0GVM2 712 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 HMX2A2RU54 273 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 LCHNA4D1U4 455 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 TCAF2A6NFQ2 919 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 TRIM49D1C9J1S8 452 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 TM9SF1O15321 606 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 CLDN11O75508 207 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 KRT38O76015 456 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 MMP2P08253 660 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 SPATA31D3P0C874 917 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 RPS24P62847 133 aaKnown RBP12.06□□□□□ -0.48
TRIM40-205ENST00000307859 IL9RQ01113 521 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 GNA12Q03113 381 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 QPCTQ16769 361 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 TMCO4Q5TGY1 634 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 PPP2R2DQ66LE6 453 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 RANBP10Q6VN20 620 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 TIFABQ6ZNK6 161 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 SPATA31D4Q6ZUB0 917 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 TMC7Q7Z402 723 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 PGBD5Q8N414 524 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 PABPC5Q96DU9 382 aaKnown RBP12.06□□□□□ -0.48
TRIM40-205ENST00000307859 APOPT1Q96IL0 206 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 MRGPRX2Q96LB1 330 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 SLC22A12Q96S37 553 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 EMILIN2Q9BXX0 1053 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 MRM3Q9HC36 420 aaKnown RBP12.06□□□□□ -0.48
TRIM40-205ENST00000307859 ATP13A1Q9HD20 1204 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 MLXIPLQ9NP71 852 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 NT5MQ9NPB1 228 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 VPS45Q9NRW7 570 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 CACNA1AO00555 2505 aa12.06□□□□□ -0.48
TRIM40-205ENST00000307859 ILVBLA1L0T0 632 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 GFRA2O00451 464 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 ATP9BO43861 1147 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 GREM1O60565 184 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 RFPL1O75677 317 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 LRG1P02750 347 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 C8AP07357 584 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 IRF1P10914 325 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 ALADP13716 330 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 TPH1P17752 444 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 CA8P35219 290 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 BMPR1AP36894 532 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 SGSHP51688 502 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 NEK3P51956 506 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 HNRNPH2P55795 449 aaKnown RBP12.05□□□□□ -0.48
TRIM40-205ENST00000307859 WNT3AP56704 352 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 DNAJC3Q13217 504 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 LBRQ14739 615 aaKnown RBP12.05□□□□□ -0.48
TRIM40-205ENST00000307859 SLC1A5Q15758 541 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 ALG1LQ6GMV1 187 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 CES3Q6UWW8 571 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 PACS1Q6VY07 963 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 Q6ZNB5 142 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 RGS9BPQ6ZS82 235 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 GAREM2Q75VX8 874 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 SETD3Q86TU7 594 aaPredicted RBP12.05□□□□□ -0.48
TRIM40-205ENST00000307859 RASSF3Q86WH2 238 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 FAM217AQ8IXS0 508 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 LRRC34Q8IZ02 419 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 OR52K2Q8NGK3 314 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms