RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ERMARDQ5T6L9 678 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 NAPEPLDQ6IQ20 393 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 NEK5Q6P3R8 708 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 ERN2Q76MJ5 926 aaKnown RBP26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 CASKIN2Q8WXE0 1202 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 ARRDC3Q96B67 414 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 MYO1AQ9UBC5 1043 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 PCSK1NQ9UHG2 260 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 PCDHB9Q9Y5E1 797 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 ACTL7AQ9Y615 435 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 WASF2Q9Y6W5 498 aa26.93■■□□□ 1.9
CDKN2A-201ENST00000304494 PRPSAP2O60256 369 aa26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 GYPCP04921 128 aa26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 TAS2R38P59533 333 aa26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 SIM1P81133 766 aaPredicted RBP26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 SETMARQ53H47 684 aaPredicted RBP26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 PSTKQ8IV42 348 aaKnown RBP26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 UMODL1-AS1Q8N2C9 162 aa26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 TM6SF2Q9BZW4 377 aa26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 XPO4Q9C0E2 1151 aaKnown RBP26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 DHX35Q9H5Z1 703 aaKnown RBP26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 NOL6Q9H6R4 1146 aaKnown RBP26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 ARHGAP20Q9P2F6 1191 aa26.92■■□□□ 1.9
CDKN2A-201ENST00000304494 PLXNA2O75051 1894 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 SPAARA0A1B0GVQ0 90 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 CBFA2T2O43439 604 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 BUB1O43683 1085 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 GSRP00390 522 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 ITGB7P26010 798 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 MAT2AP31153 395 aaKnown RBP26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 NEK3P51956 506 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 SNRPD1P62314 119 aaKnown RBP26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 ACAP1Q15027 740 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 ZNF423Q2M1K9 1284 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 RYBPQ8N488 228 aaPredicted RBP26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 ARFGAP1Q8N6T3 406 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 OR2AP1Q8NGE2 309 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 LRIG1Q96JA1 1093 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 CAMK1GQ96NX5 476 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 SNRNP25Q9BV90 132 aaKnown RBP26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 TRIM7Q9C029 511 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 ZDHHC6Q9H6R6 413 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 GPATCH2LQ9NWQ4 482 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 CHD5Q8TDI0 1954 aa26.91■■□□□ 1.9
CDKN2A-201ENST00000304494 A0A1W2PR77 199 aa26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 RASA4BC9J798 803 aa26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 EEF2KO00418 725 aaKnown RBP26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 FLRT2O43155 660 aa26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 RASA4O43374 803 aa26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 RNGTTO60942 597 aaKnown RBP26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 MIPP30301 263 aa26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 CCT8P50990 548 aa26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 ZNF135P52742 658 aaPredicted RBP26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 TRIP6Q15654 476 aaKnown RBP26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 INO80DQ53TQ3 878 aaPredicted RBP26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 KCNT1Q5JUK3 1230 aa26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 SETD7Q8WTS6 366 aaKnown RBP26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 HMCESQ96FZ2 354 aa26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 PEBP4Q96S96 227 aa26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 TSPY26PQ9H489 355 aa26.9■■□□□ 1.9
CDKN2A-201ENST00000304494 PRAMEF26H0Y7S4 382 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 LRCH4O75427 683 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 WNT1P04628 370 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 CASP14P31944 242 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 PCK1P35558 622 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 NDST2P52849 883 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 FOXC1Q12948 553 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 SERINC3Q13530 473 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 NFKBIBQ15653 356 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 FBXL19Q6PCT2 694 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 LEKR1Q6ZMV7 388 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 DBX2Q6ZNG2 339 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 MFSD2AQ8NA29 543 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 GDF3Q9NR23 364 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 PCOLCE2Q9UKZ9 415 aa26.89■■□□□ 1.9
CDKN2A-201ENST00000304494 A0A1W2PQU0 124 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 H0Y8X5 98 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 RNF103O00237 685 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 WNT9AO14904 365 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 DAPK3O43293 454 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 MAGEC1O60732 1142 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 TMCC1O94876 653 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 POP4O95707 220 aaKnown RBP26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 ADRB3P13945 408 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 TRIM14Q14142 442 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 STAT4Q14765 748 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 CA9Q16790 459 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 IQCHQ86VS3 1027 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 ELF4Q99607 663 aaPredicted RBP26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 OSBPL1AQ9BXW6 950 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 THAP2Q9H0W7 228 aa26.88■■□□□ 1.89
CDKN2A-201ENST00000304494 A0A087X0T9 212 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 TLR4O00206 839 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 KRIT1O00522 736 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 KCNK3O14649 394 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 PCDHGA12O60330 932 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 CBFA2T3O75081 653 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 TRIM16O95361 564 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 FAM228BP0C875 321 aa26.87■■□□□ 1.89
CDKN2A-201ENST00000304494 FAM193AP78312 1265 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms