RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 LINC00854A0A1B0GVQ3 168 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 PTGES3LE9PB15 166 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF24P17028 368 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ENPEPQ07075 957 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 CYP20A1Q6UW02 462 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 CYP2R1Q6VVX0 501 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 CARNMT1Q8N4J0 409 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 CAPSLQ8WWF8 208 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 HGH1Q9BTY7 390 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 DGCR6LQ9BY27 220 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 MOV10Q9HCE1 1003 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 TAF6LQ9Y6J9 622 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 RBAK-RBAKDNI3L0D1 243 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 IGSF6O95976 241 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 MBL2P11226 248 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 COX7A2P14406 83 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 TNFAIP8L3Q5GJ75 292 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 RBM44Q6ZP01 1051 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ILDR2Q71H61 639 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 PTAR1Q7Z6K3 402 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 RNF180Q86T96 592 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 TTC7BQ86TV6 843 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 BRSK2Q8IWQ3 736 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 PHF21BQ96EK2 531 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ELP3Q9H9T3 547 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 UXTQ9UBK9 157 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ST3GAL5Q9UNP4 418 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 TMX2Q9Y320 296 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 SNAP23O00161 211 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 TSPAN9O75954 239 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF12P17014 697 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 MYL9P24844 172 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 DSG3P32926 999 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 GCLCP48506 637 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 PTSQ03393 145 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 NRF1Q16656 503 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 CCDC157Q569K6 752 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 DENND5AQ6IQ26 1287 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 TSEN2Q8NCE0 465 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 PTCD2Q8WV60 388 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 EEF1AKMT1Q8WVE0 214 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 PDCD10Q9BUL8 212 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 RBM22Q9NW64 420 aaKnown RBP eCLIP7.73□□□□□ -1.172e-6■■■■□ 25.4
SF3B3-201ENST00000302516 PHF11Q9UIL8 331 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 TBC1D30Q9Y2I9 924 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 IRAK3Q9Y616 596 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 SLC28A1O00337 649 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 DDX3XO00571 662 aaKnown RBP eCLIP7.73□□□□□ -1.178e-9■■■□□ 15
SF3B3-201ENST00000302516 LGALS3BPQ08380 585 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 RBM4BQ9BQ04 359 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 RBM4Q9BWF3 364 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 AASDHPPTQ9NRN7 309 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 PNMA8BQ9ULN7 279 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 DUOX1Q9NRD9 1551 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 CCDC189A1A4V9 331 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 MPZL2O60487 215 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 KLHL18O94889 574 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 PIGNO95427 931 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 EFEMP1Q12805 493 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 TSC22D1Q15714 1073 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 OLFML1Q6UWY5 402 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 METTL7BQ6UX53 244 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 HAVCR1Q96D42 359 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SLC47A1Q96FL8 570 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 MBOAT7Q96N66 472 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 NFAT5O94916 1531 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 BTN3A1O00481 513 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 RAB10P61026 200 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CRY1Q16526 586 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 PYDC2Q56P42 97 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CBWD3Q5JTY5 395 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CBWD5Q5RIA9 395 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 FAM131BQ86XD5 332 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 MAGEE2Q8TD90 523 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 BBS4Q96RK4 519 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 HOPXQ9BPY8 73 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SENP6Q9GZR1 1112 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SALL3Q9BXA9 1300 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SNAPC5O75971 98 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 MTA2O94776 668 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 LRIG2O94898 1065 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CSPG5O95196 566 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 GLRA2P23416 452 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 RAB2AP61019 212 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 AMPD2Q01433 879 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 DSG4Q86SJ6 1040 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 PSTKQ8IV42 348 aaKnown RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 FAM71AQ8IYT1 594 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CLYBLQ8N0X4 340 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CERS2Q96G23 380 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 S100A13Q99584 98 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 TDRD1Q9BXT4 1180 aaKnown RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 POLR1BQ9H9Y6 1135 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SLC9A8Q9Y2E8 581 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 ADAMTS13Q76LX8 1427 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CHST10O43529 356 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 OR6B1O95007 311 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 FGFR3P22607 806 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SSTR1P30872 391 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 PPP1R15BQ5SWA1 713 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms