RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 MOSPD2Q8NHP6 518 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 MYOZ2Q9NPC6 264 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 RBM7Q9Y580 266 aaKnown RBP12.49□□□□□ -0.41
ABCA3-201ENST00000301732 NADKO95544 446 aaPredicted RBP12.49□□□□□ -0.41
ABCA3-201ENST00000301732 IFNA14P01570 189 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 CHRNGP07510 517 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 RPL14P50914 215 aaKnown RBP12.49□□□□□ -0.41
ABCA3-201ENST00000301732 ARF3P61204 181 aaPredicted RBP12.49□□□□□ -0.41
ABCA3-201ENST00000301732 STXBP1P61764 594 aaKnown RBP12.49□□□□□ -0.41
ABCA3-201ENST00000301732 ARF1P84077 181 aaKnown RBP12.49□□□□□ -0.41
ABCA3-201ENST00000301732 NEK5Q6P3R8 708 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 SH3RF1Q7Z6J0 888 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 BAP1Q92560 729 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 CGRRF1Q99675 332 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 CELF2O95319 508 aaKnown RBP12.49□□□□□ -0.41
ABCA3-201ENST00000301732 ACADMP11310 421 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 PLD1Q13393 1074 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 SLC39A12Q504Y0 691 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 PITRM1Q5JRX3 1037 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 SPPL2CQ8IUH8 684 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 ABRAQ8N0Z2 381 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 CCDC115Q96NT0 180 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 C17orf75Q9HAS0 396 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 C8orf4Q9NR00 106 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 GDF3Q9NR23 364 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 COMMD9Q9P000 198 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 RAD54BQ9Y620 910 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 AP4B1Q9Y6B7 739 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 OR10H3O60404 316 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 EGFLAMQ63HQ2 1017 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 TXNRD3Q86VQ6 643 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 SLITRK2Q9H156 845 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 PHF11Q9UIL8 331 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 LACTBL1A8MY62 500 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 PRR5-ARHGAP8B1AHC4 643 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 MAGEB2O15479 319 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 RAMP2O60895 175 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 THP07101 528 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 GJB1P08034 283 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 NT5C2P49902 561 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 ARHGAP8P85298 464 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 DGKZQ13574 1117 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 PALB2Q86YC2 1186 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 FAM47BQ8NA70 645 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 ATP6V1C2Q8NEY4 427 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 OR56A4Q8NGH8 313 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 TIPINQ9BVW5 301 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 ARL8BQ9NVJ2 186 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 CDH9Q9ULB4 789 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 CEP170Q5SW79 1584 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 NRKQ7Z2Y5 1582 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 CFAP74Q9C0B2 1584 aa12.49□□□□□ -0.41
ABCA3-201ENST00000301732 LOC110117498-PIK3R3F6TDL0 507 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 KPNA6O60684 536 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 POU2F1P14859 743 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 BUD31P41223 144 aaPredicted RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 BCAP31P51572 246 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 SIM2Q14190 667 aaPredicted RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 DLG2Q15700 870 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 CPSF6Q16630 551 aaKnown RBP eCLIP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 CHPFQ8IZ52 775 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 ETNPPLQ8TBG4 499 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 CPNE1Q99829 537 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 ETNK2Q9NVF9 386 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 OPTCQ9UBM4 332 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 DCDC2CA8MYV0 355 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 ERAL1O75616 437 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 WARSP23381 471 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 BST1Q10588 318 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 IL18Q14116 193 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 ARHGAP15Q53QZ3 475 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 ZCCHC8Q6NZY4 707 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 BRINP3Q76B58 766 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 NDRG1Q92597 394 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 RSL24D1Q9UHA3 163 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 YARS2Q9Y2Z4 477 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 SNX3O60493 162 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 RBMXL2O75526 392 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 HOXD10P28358 340 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 MTTPP55157 894 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 CDH17Q12864 832 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 LDB1Q86U70 411 aaPredicted RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 ZNF433Q8N7K0 673 aaPredicted RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 TAS2R13Q9NYV9 303 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 NCAPD2Q15021 1401 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 ABHD14A-ACY1A0A1B0GW23 586 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 FAM172BPA6NC97 362 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 INMTO95050 263 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 CYP2A7P20853 494 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 TBX4P57082 545 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 PSME3P61289 254 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 PCDH1Q08174 1060 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 WDR59Q6PJI9 974 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 GPRC5AQ8NFJ5 357 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 ATXN2LQ8WWM7 1075 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 TRBV23OR9-2A0A075B6M9 112 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 KIAA0391O15091 583 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 ZNF432O94892 652 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 PSMA3P25788 255 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 316.9 ms