RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 PMS2P3Q13401 168 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 ZIK1Q3SY52 487 aaPredicted RBP14.86□□□□□ -0.03
COL6A2-201ENST00000300527 REP15Q6BDI9 236 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 HMBOX1Q6NT76 420 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 ASB9Q96DX5 294 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 PCYT2Q99447 389 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 MRPL45Q9BRJ2 306 aaKnown RBP14.86□□□□□ -0.03
COL6A2-201ENST00000300527 BCO2Q9BYV7 579 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 DRC3Q9H069 523 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 TRPC5Q9UL62 973 aaPredicted RBP14.86□□□□□ -0.03
COL6A2-201ENST00000300527 PCDHGA7Q9Y5G6 932 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 DLX3O60479 287 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 SRP72O76094 671 aaKnown RBP14.86□□□□□ -0.03
COL6A2-201ENST00000300527 DDHD2O94830 711 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 FUCA1P04066 466 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 NMBRP28336 390 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 HALP42357 657 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 SEPT6Q14141 434 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 TMEM132BQ14DG7 1078 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 TGFBIQ15582 683 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 ANO4Q32M45 955 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 IRGQQ8WZA9 623 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 KIF12Q96FN5 646 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 FBRSL1Q9HCM7 1045 aaKnown RBP14.86□□□□□ -0.03
COL6A2-201ENST00000300527 PTPRHQ9HD43 1115 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 IGSF9Q9P2J2 1179 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 TRIM17Q9Y577 477 aa14.86□□□□□ -0.03
COL6A2-201ENST00000300527 FUOMA2VDF0 154 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 CBFA2T3O75081 653 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 PFKMP08237 780 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 PORP16435 677 aaPredicted RBP14.85□□□□□ -0.03
COL6A2-201ENST00000300527 RABGGTBP53611 331 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 MPP1Q00013 466 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 RHDQ02161 417 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 DPYSQ14117 519 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 CAPRIN1Q14444 709 aaKnown RBP14.85□□□□□ -0.03
COL6A2-201ENST00000300527 SPANXN3Q5MJ09 141 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 C4orf22Q6V702 233 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 SIX6OS1Q8N1H7 587 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 PDZD8Q8NEN9 1154 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 POMKQ9H5K3 350 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 SLC38A7Q9NVC3 462 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 GIMAP2Q9UG22 337 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 BTAF1O14981 1849 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 SLX4Q8IY92 1834 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 NR5A2O00482 541 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 UBDO15205 165 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 MPOP05164 745 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 TXNL4AP83876 142 aaKnown RBP14.85□□□□□ -0.03
COL6A2-201ENST00000300527 TMEM132DQ14C87 1099 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 GALNT18Q6P9A2 607 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 DENND6AQ8IWF6 608 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 ARL10Q8N8L6 244 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 SLCO4A1Q96BD0 722 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 DPEP3Q9H4B8 488 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 ACAD9Q9H845 621 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 WARS2Q9UGM6 360 aaKnown RBP14.85□□□□□ -0.03
COL6A2-201ENST00000300527 DOCK5Q9H7D0 1870 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 B4GALT4O60513 344 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 YWHAQP27348 245 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 CSHL1Q14406 222 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 POU6F1Q14863 301 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 ZBED5Q49AG3 693 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 FAM160B1Q5W0V3 765 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 CLEC6AQ6EIG7 209 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 LZTR1Q8N653 840 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 BPIFB6Q8NFQ5 453 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 ELMO2Q96JJ3 720 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 CROTQ9UKG9 612 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 DGKBQ9Y6T7 804 aa14.85□□□□□ -0.03
COL6A2-201ENST00000300527 LOXHD1Q8IVV2 1947 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 B4GAT1O43505 415 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 NCAM1P13591 858 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 SLC12A2P55011 1212 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 STX5Q13190 355 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 CYP2A13Q16696 494 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 OTUD3Q5T2D3 398 aaPredicted RBP14.84□□□□□ -0.03
COL6A2-201ENST00000300527 LCLAT1Q6UWP7 414 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 ZYG11AQ6WRX3 759 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 MAGEE2Q8TD90 523 aaPredicted RBP14.84□□□□□ -0.03
COL6A2-201ENST00000300527 BORCS5Q969J3 196 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 MPHOSPH6Q99547 160 aaKnown RBP14.84□□□□□ -0.03
COL6A2-201ENST00000300527 NAT9Q9BTE0 207 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 ADI1Q9BV57 179 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 TMEM221A6NGB7 291 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 PPEF2O14830 753 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 MDM4O15151 490 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 CDH3P22223 829 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 NR2C2P49116 596 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 FKBP1AP62942 108 aaKnown RBP14.84□□□□□ -0.03
COL6A2-201ENST00000300527 BFSP2Q13515 415 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 IER5Q5VY09 327 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 CNSTQ6PJW8 725 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 KCTD8Q6ZWB6 473 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 SNX29P2Q8IUI4 249 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 ZC3H7AQ8IWR0 971 aaKnown RBP14.84□□□□□ -0.03
COL6A2-201ENST00000300527 LRCH3Q96II8 777 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 ATXN3LQ9H3M9 355 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 SPAG4Q9NPE6 437 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 CACNA2D2Q9NY47 1150 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms