RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 GIPC2Q8TF65 315 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 RBM22Q9NW64 420 aaKnown RBP eCLIP10.26□□□□□ -0.77
FOXN4-201ENST00000299162 UBAP1Q9NZ09 502 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 MOCS1Q9NZB8 636 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 A0A096LPK6 155 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 HACD1B0YJ81 288 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 E9PBE3 544 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 TK2O00142 265 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 MAGEB3O15480 346 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 SEPT4O43236 478 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 KLHL41O60662 606 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 GJB3O75712 270 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 PDE5AO76074 875 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 FBXO21O94952 628 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 MPP1Q00013 466 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 DSG1Q02413 1049 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 PSMD5Q16401 504 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 ANKRD20A4Q4UJ75 823 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 TEX44Q53QW1 395 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 FAM117BQ6P1L5 589 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 ST13P4Q8IZP2 240 aaPredicted RBP10.26□□□□□ -0.77
FOXN4-201ENST00000299162 TMEM86AQ8N2M4 240 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 CCNYL1Q8N7R7 359 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 SMC1BQ8NDV3 1235 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 KCTD13Q8WZ19 329 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 TASP1Q9H6P5 420 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 INIPQ9NRY2 104 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 TDRKHQ9Y2W6 561 aaKnown RBP10.26□□□□□ -0.77
FOXN4-201ENST00000299162 GIT1Q9Y2X7 761 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 AK5Q9Y6K8 562 aa10.26□□□□□ -0.77
FOXN4-201ENST00000299162 HHLA1C9JL84 531 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 EIF3FO00303 357 aaPredicted RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 PRKCGP05129 697 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 SLC1A6P48664 564 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 GALK1P51570 392 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 CCNG1P51959 295 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 TUSC3Q13454 348 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 MAP7Q14244 749 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 USP10Q14694 798 aaKnown RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 CNGA3Q16281 694 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 FAM171A1Q5VUB5 890 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 RPS27LQ71UM5 84 aaKnown RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 ABI1Q8IZP0 508 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 EXT2Q93063 718 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 LRRC39Q96DD0 335 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 ZNF419Q96HQ0 510 aaPredicted RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 MARK4Q96L34 752 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 FRMD8Q9BZ67 464 aaPredicted RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 SLC39A8Q9C0K1 460 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 LRRC40Q9H9A6 602 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 NT5MQ9NPB1 228 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 A0A0U1RQF3 1178 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 GOLGA8CPA6NN73 597 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 RNASEH1O60930 286 aaKnown RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 MT-CO1P00395 513 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 GSTA2P09210 222 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 MAGEA3P43357 314 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 PLK1P53350 603 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 NXNQ6DKJ4 435 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 ESRP1Q6NXG1 681 aaKnown RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 DUS1LQ6P1R4 473 aaKnown RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 RIPOR1Q6ZS17 1223 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 NCCRP1Q6ZVX7 275 aaPredicted RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 NANOGNBQ7Z5D8 188 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 SLC41A1Q8IVJ1 513 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 RNF168Q8IYW5 571 aaPredicted RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 CFAP52Q8N1V2 620 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 IFT43Q96FT9 208 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 SPATA16Q9BXB7 569 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 OSER1Q9NX31 292 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 PPM1HQ9ULR3 514 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 C5orf42Q9H799 3197 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 HSPA4LO95757 839 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 AP2A1O95782 977 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 DHRS4L1P0CG22 281 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 RPL17P18621 184 aaKnown RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 MX2P20592 715 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 GP5P40197 560 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 GLUD2P49448 558 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 ATN1P54259 1190 aaPredicted RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 LIN52Q52LA3 116 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 ZBTB46Q86UZ6 589 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 ZSCAN18Q8TBC5 510 aaPredicted RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 NT5C3BQ969T7 300 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 CYP4F12Q9HCS2 524 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 GMIPQ9P107 970 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 PDP2Q9P2J9 529 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 FETUBQ9UGM5 382 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 TSR3Q9UJK0 312 aaKnown RBP10.25□□□□□ -0.77
FOXN4-201ENST00000299162 EMCNQ9ULC0 261 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 ACTL7AQ9Y615 435 aa10.25□□□□□ -0.77
FOXN4-201ENST00000299162 AURKAO14965 403 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 CNTN5O94779 1100 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 SERPINB9P50453 376 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 PRPSAP1Q14558 356 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 GRM3Q14832 879 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 PAFAH1B3Q15102 231 aaKnown RBP10.24□□□□□ -0.77
FOXN4-201ENST00000299162 TRIP10Q15642 601 aa10.24□□□□□ -0.77
FOXN4-201ENST00000299162 IYDQ6PHW0 289 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms