RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 INPP4BO15327 924 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 CABYRO75952 493 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ENDOD1O94919 500 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 FASP25445 335 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 PSMA4P25789 261 aaKnown RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 HALP42357 657 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 RXRGP48443 463 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 NAB1Q13506 487 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ZIK1Q3SY52 487 aaPredicted RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 SAMD4BQ5PRF9 694 aaKnown RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 GALNT18Q6P9A2 607 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 TMEM126BQ8IUX1 230 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ZNF567Q8N184 647 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 CENPSQ8N2Z9 138 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ARL10Q8N8L6 244 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 BPIFB6Q8NFQ5 453 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 DQX1Q8TE96 717 aaKnown RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ARNTL2Q8WYA1 636 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 CASP10Q92851 521 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 RNF34Q969K3 372 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 SEPHS2Q99611 448 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 BEGAINQ9BUH8 593 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ADI1Q9BV57 179 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 UNC93B1Q9H1C4 597 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 SOX17Q9H6I2 414 aaPredicted RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 PADI4Q9UM07 663 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 SOCS2O14508 198 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ALOX15P16050 662 aaPredicted RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 PCYT1AP49585 367 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 OCA2Q04671 838 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 POU6F1Q14863 301 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 FUT11Q495W5 492 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 HABP4Q5JVS0 413 aaKnown RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 PRAMEF18Q5VWM3 479 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 STYK1Q6J9G0 422 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 NXNL1Q96CM4 212 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 HIPK3Q9H422 1215 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 TUT1Q9H6E5 874 aaKnown RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 PRORSD1PA6NEY8 169 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 EEF2KO00418 725 aaKnown RBP11.55□□□□□ -0.56
TRUB1-201ENST00000298746 ANGPT2O15123 496 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 CRCPO75575 148 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 IL18RAPO95256 599 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 KCNH1O95259 989 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 ATE1O95260 518 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 ESRRBO95718 433 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 SNRPB2P08579 225 aaKnown RBP11.55□□□□□ -0.56
TRUB1-201ENST00000298746 STMN1P16949 149 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 RBP5P82980 135 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 PRKCQQ04759 706 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 AARS2Q5JTZ9 985 aaKnown RBP11.55□□□□□ -0.56
TRUB1-201ENST00000298746 Q6ZNX1 250 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 PDZD4Q76G19 769 aaPredicted RBP11.55□□□□□ -0.56
TRUB1-201ENST00000298746 TTC30AQ86WT1 665 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 DHRSXQ8N5I4 330 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 PCYOX1LQ8NBM8 494 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 SHCBP1Q8NEM2 672 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 HM13Q8TCT9 377 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 SEPT1Q8WYJ6 367 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 FBXL20Q96IG2 436 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 BIRC8Q96P09 236 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 TEX13BQ9BXU2 312 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 KLHL25Q9H0H3 589 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 ZFYVE28Q9HCC9 887 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 TUBGCP4Q9UGJ1 667 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 ADAM28Q9UKQ2 775 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 WDR37Q9Y2I8 494 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 LOXHD1Q8IVV2 1947 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 FUOMA2VDF0 154 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 TCAF2A6NFQ2 919 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 SPATA31C2B4DYI2 1134 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 NRP1O14786 923 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 MDM4O15151 490 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 GRID2O43424 1007 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 B4GALT4O60513 344 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 PEX10O60683 326 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 TADA2AO75478 443 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 ALDH1A2O94788 518 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 SUPT7LO94864 414 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 PDCD4Q53EL6 469 aaKnown RBP11.55□□□□□ -0.56
TRUB1-201ENST00000298746 NCBP2-AS2Q69YL0 99 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 REP15Q6BDI9 236 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 EFCAB12Q6NXP0 572 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 CYP4V2Q6ZWL3 525 aaPredicted RBP11.55□□□□□ -0.56
TRUB1-201ENST00000298746 GPR180Q86V85 440 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 DDIASQ8IXT1 998 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 ZC3H15Q8WU90 426 aaKnown RBP11.55□□□□□ -0.56
TRUB1-201ENST00000298746 TRIM15Q9C019 465 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 DPP3Q9NY33 737 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRUB1-201ENST00000298746 GMPR2Q9P2T1 348 aaKnown RBP11.55□□□□□ -0.56
TRUB1-201ENST00000298746 FADS3Q9Y5Q0 445 aa11.55□□□□□ -0.56
TRUB1-201ENST00000298746 SLC7A1P30825 629 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 MAGEA3P43357 314 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 SLC12A1Q13621 1099 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 ITGA7Q13683 1181 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 CYP51A1Q16850 503 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 ZNF829Q3KNS6 432 aaPredicted RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 LCLAT1Q6UWP7 414 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms