RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ECI2O75521 394 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 ANXA9O76027 345 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 MT-CYBP00156 380 aaPredicted RBP25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 MMP2P08253 660 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 CISD3P0C7P0 127 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 MLNP12872 115 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 PSMC3P17980 439 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 LMAN1P49257 510 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 LRRC8BQ6P9F7 803 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 LINGO4Q6UY18 593 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 TRMT10CQ7L0Y3 403 aaKnown RBP25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 IQCKQ8N0W5 287 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 CDX2Q99626 313 aaPredicted RBP25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 MGME1Q9BQP7 344 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 PABPC3Q9H361 631 aaKnown RBP25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 CDC42EP4Q9H3Q1 356 aaKnown RBP25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 ECT2Q9H8V3 914 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 TTLL3Q9Y4R7 772 aa25.02■■□□□ 1.6
GTF2A1-201ENST00000298173 GRXCR2A6NFK2 248 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 AVILO75366 819 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 MAGEA4P43358 317 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 SARNPP82979 210 aaKnown RBP25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 PDIA2Q13087 525 aaKnown RBP25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 ZNF235Q14590 738 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 RETSATQ6NUM9 610 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 ETFBKMTQ8IXQ9 262 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 AGGF1Q8N302 714 aaeCLIP25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 BBS5Q8N3I7 341 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 MYLIPQ8WY64 445 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 RPP25Q9BUL9 199 aaKnown RBP25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 POLR1EQ9GZS1 481 aaKnown RBP25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 VIPAS39Q9H9C1 493 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 XAB2Q9HCS7 855 aaKnown RBP25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 SAYSD1Q9NPB0 183 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 UBP1Q9NZI7 540 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 GGA2Q9UJY4 613 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 MT-CO1P00395 513 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 PABPC1P11940 636 aaKnown RBP25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 CR2P20023 1033 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 SLC20A2Q08357 652 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 SPARCL1Q14515 664 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 DMC1Q14565 340 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 FUT11Q495W5 492 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 ADIPOR2Q86V24 386 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 NAT16Q8N8M0 369 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 WDR83Q9BRX9 315 aaKnown RBP25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 LRRC40Q9H9A6 602 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 VPS45Q9NRW7 570 aa25.01■■□□□ 1.59
GTF2A1-201ENST00000298173 GOLGA6CA6NDK9 693 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 GOLGA6BA6NDN3 693 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 GOLGA6DP0CG33 693 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 ADRA1AP35348 466 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 GEMP55040 296 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 DSC2Q02487 901 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 ITKQ08881 620 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 MPP3Q13368 585 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 FASTKD3Q14CZ7 662 aaKnown RBP25■■□□□ 1.59
GTF2A1-201ENST00000298173 KDELC1Q6UW63 502 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25■■□□□ 1.591e-12■■■■□ 22.4
GTF2A1-201ENST00000298173 XPO6Q96QU8 1125 aaKnown RBP25■■□□□ 1.59
GTF2A1-201ENST00000298173 KXD1Q9BQD3 176 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 CINPQ9BW66 212 aaPredicted RBP25■■□□□ 1.59
GTF2A1-201ENST00000298173 GOLGA6AQ9NYA3 693 aa25■■□□□ 1.59
GTF2A1-201ENST00000298173 ANHXE9PGG2 379 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 TRIM24O15164 1050 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 BANF1O75531 89 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 TMCC1O94876 653 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 TTC4O95801 387 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 RGRP47804 291 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 GEMIN4P57678 1058 aaKnown RBP24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 NSUN2Q08J23 767 aaKnown RBP eCLIP24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 OLIG2Q13516 323 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 KYNUQ16719 465 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 UBAP2Q5T6F2 1119 aaKnown RBP24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 Q7L0L9 218 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 C12orf40Q86WS4 652 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 MRGPRX2Q96LB1 330 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 SIGLEC10Q96LC7 697 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 SEMA3CQ99985 751 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 UBE2ZQ9H832 354 aaPredicted RBP24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 CASS4Q9NQ75 786 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 HAUS2Q9NVX0 235 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 NINJ2Q9NZG7 142 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 SLC27A6Q9Y2P4 619 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 TEX264Q9Y6I9 313 aa24.99■■□□□ 1.59
GTF2A1-201ENST00000298173 RIPK2O43353 540 aa24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 SERPINH1P50454 418 aaKnown RBP24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 SKOR1P84550 965 aa24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 MTM1Q13496 603 aa24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 GRM2Q14416 872 aa24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 TMEM215Q68D42 235 aa24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 MTSS1LQ765P7 747 aa24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 ZBED8Q8IZ13 594 aa24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 UBLCP1Q8WVY7 318 aaPredicted RBP24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 TTC17Q96AE7 1141 aa24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 C9orf72Q96LT7 481 aa24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 LHX3Q9UBR4 397 aa24.98■■□□□ 1.59
GTF2A1-201ENST00000298173 TTC24A2A3L6 582 aaPredicted RBP24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 GJB3O75712 270 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 CES1P23141 567 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms