RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 SLC35E2BP0CK96 405 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NMBRP28336 390 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ADRA1AP35348 466 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC26A3P40879 764 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CD151P48509 253 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NKX3-2P78367 333 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CDC16Q13042 620 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MTA1Q13330 715 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CUL3Q13618 768 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 LAMB3Q13751 1172 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PSMD5Q16401 504 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 LRRC8EQ6NSJ5 796 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RGMBQ6NW40 437 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ARHGAP12Q8IWW6 846 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TP53INP2Q8IXH6 220 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DEFB107AQ8IZN7 70 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TNS4Q8IZW8 715 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 KYQ8NBH2 561 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 C2CD4AQ8NCU7 369 aaPredicted RBP10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DLG3Q92796 817 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CLPTM1LQ96KA5 538 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 C1orf74Q96LT6 269 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 KLHL4Q9C0H6 718 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ZNF385DQ9H6B1 395 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ARNT2Q9HBZ2 717 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 VPS45Q9NRW7 570 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RNF19AQ9NV58 838 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NCKIPSDQ9NZQ3 722 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 POMPQ9Y244 141 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NLRC5Q86WI3 1866 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NEBLO76041 1014 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PENKP01210 267 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FESP07332 822 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 GRIA4P48058 902 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CLCN5P51795 746 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TNK2Q07912 1038 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 GALNT1Q10472 559 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CCNIQ14094 377 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MAPRE2Q15555 327 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TIGD5Q53EQ6 642 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PRAMEF19Q5SWL8 479 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FAM182AQ5T1J6 154 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 OR52E8Q6IFG1 317 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NAPRTQ6XQN6 538 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TMC7Q7Z402 723 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SERINC5Q86VE9 423 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PDSS2Q86YH6 399 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 IFNL1Q8IU54 200 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 IFT43Q96FT9 208 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SERPINB11Q96P15 392 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RTP3Q9BQQ7 232 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 UPF3AQ9H1J1 476 aaKnown RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TREX1Q9NSU2 369 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ZNF358Q9NW07 568 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PPM1HQ9ULR3 514 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TDRD15B5MCY1 1934 aaKnown RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 HEATR9A2RTY3 570 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MAFKO60675 156 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 BAG2O95816 211 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ATP5F1P24539 256 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PIK3R1P27986 724 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ARCN1P48444 511 aaKnown RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ZNF157P51786 506 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CACNA2D1P54289 1103 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 IRF9Q00978 393 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MSLNQ13421 630 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TUSC3Q13454 348 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CYLC2Q14093 348 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TAF1CQ15572 869 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC9B1Q4ZJI4 515 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 BTBD8Q5XKL5 378 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FRMD7Q6ZUT3 714 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SAPCD2Q86UD0 394 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 KBTBD6Q86V97 674 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PGAM4Q8N0Y7 254 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PHTF2Q8N3S3 785 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TMEM151AQ8N4L1 468 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 POU5F2Q8N7G0 328 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RTL3Q8N8U3 475 aaKnown RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 EDEM1Q92611 657 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SCYL1Q96KG9 808 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TTC1Q99614 292 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TRMOQ9BU70 441 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FSD1LQ9BXM9 530 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 EML4Q9HC35 981 aaKnown RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TMEM30AQ9NV96 361 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 UTP6Q9NYH9 597 aaKnown RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CLIC5Q9NZA1 410 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FLRT1Q9NZU1 646 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DLGAP2Q9P1A6 1054 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 IPO11Q9UI26 975 aaKnown RBP10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CPA4Q9UI42 421 aa10.14□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PLXNA3P51805 1871 aa10.13□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FAM95CA0A1B0GW59 222 aa10.13□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DFFAO00273 331 aa10.13□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ZBTB14O43829 449 aa10.13□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PIGNO95427 931 aa10.13□□□□□ -0.79
TNFRSF11B-201ENST00000297350 HSPA1AP0DMV8 641 aaKnown RBP10.13□□□□□ -0.79
TNFRSF11B-201ENST00000297350 HSPA1BP0DMV9 641 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms