RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TLL2Q9Y6L7 1015 aa11.95□□□□□ -0.5
RHO-201ENST00000296271 COL4A4P53420 1690 aaPredicted RBP11.94□□□□□ -0.5
RHO-201ENST00000296271 TMEM233B4DJY2 109 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 TBX10O75333 385 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 MLLT6P55198 1093 aaPredicted RBP11.94□□□□□ -0.5
RHO-201ENST00000296271 MXRA7P84157 204 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 SREBF2Q12772 1141 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 PRPSAP1Q14558 356 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 FAM171A1Q5VUB5 890 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 IL31Q6EBC2 164 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 PKN3Q6P5Z2 889 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 CNSTQ6PJW8 725 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 OR6Y1Q8NGX8 325 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 PSMG2Q969U7 264 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 NXNL1Q96CM4 212 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 MARK4Q96L34 752 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 HAPLN3Q96S86 360 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 ZCWPW1Q9H0M4 648 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 CYP4F11Q9HBI6 524 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 RGS18Q9NS28 235 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 RUVBL2Q9Y230 463 aaKnown RBP11.94□□□□□ -0.5
RHO-201ENST00000296271 RAD54BQ9Y620 910 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 DCXO43602 365 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 CACNG3O60359 315 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 TADA2AO75478 443 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 WFS1O76024 890 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 VNN2O95498 520 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 SERPINA6P08185 405 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 PIRTP0C851 137 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 ADRA1AP35348 466 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 CD86P42081 329 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 MS4A13Q5J8X5 152 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 ZNF470Q6ECI4 717 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 RNF135Q8IUD6 432 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 CFAP52Q8N1V2 620 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 RTL3Q8N8U3 475 aaKnown RBP11.94□□□□□ -0.5
RHO-201ENST00000296271 GIPC2Q8TF65 315 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 ISL2Q96A47 359 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 SCYL1Q96KG9 808 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 TSGA13Q96PP4 275 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 PANX3Q96QZ0 392 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 FCRL5Q96RD9 977 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 FSD1LQ9BXM9 530 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 ACE2Q9BYF1 805 aaPredicted RBP11.94□□□□□ -0.5
RHO-201ENST00000296271 SLC7A8Q9UHI5 535 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 TAGLN3Q9UI15 199 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 DSEQ9UL01 958 aa11.94□□□□□ -0.5
RHO-201ENST00000296271 PATJQ8NI35 1801 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 SCAMP3O14828 347 aaKnown RBP11.93□□□□□ -0.5
RHO-201ENST00000296271 MTSS1O43312 755 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 PDE5AO76074 875 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 HSPA4LO95757 839 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 HOXC13P31276 330 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 CPOXP36551 454 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 ACVRL1P37023 503 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 ABL2P42684 1182 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 NAGLUP54802 743 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 WNT3AP56704 352 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 NAB1Q13506 487 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 GPNMBQ14956 572 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 WASHC2DQ5SRD0 308 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 STXBP5Q5T5C0 1151 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 TMEM198Q66K66 360 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 SLC24A5Q71RS6 500 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 PGBD5Q8N414 524 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 FSTL5Q8N475 847 aaPredicted RBP11.93□□□□□ -0.5
RHO-201ENST00000296271 CD99L2Q8TCZ2 262 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 FAM136AQ96C01 138 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 SMIM14Q96QK8 99 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 VAT1Q99536 393 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 GPR22Q99680 433 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 SEPT5Q99719 369 aaPredicted RBP11.93□□□□□ -0.5
RHO-201ENST00000296271 CCSER2Q9H7U1 834 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 DOCK4Q8N1I0 1966 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 ERI2A8K979 691 aaKnown RBP11.93□□□□□ -0.5
RHO-201ENST00000296271 SPECC1L-ADORA2AF8WAN1 911 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 RPL17P18621 184 aaKnown RBP11.93□□□□□ -0.5
RHO-201ENST00000296271 EPHA3P29320 983 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 ELF1P32519 619 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 HARS2P49590 506 aaKnown RBP11.93□□□□□ -0.5
RHO-201ENST00000296271 TBX4P57082 545 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 TAS2R39P59534 338 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 TAF11Q15544 211 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 CTXN3Q4LDR2 81 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 PCID2Q5JVF3 399 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 BRMS1LQ5PSV4 323 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 PDPK2PQ6A1A2 396 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 RNF19BQ6ZMZ0 732 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 ZNF683Q8IZ20 524 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 NUP93Q8N1F7 819 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 GIMAP7Q8NHV1 300 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 RAB3IL1Q8TBN0 382 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 PPP4R1Q8TF05 950 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 SUDS3Q9H7L9 328 aaPredicted RBP11.93□□□□□ -0.5
RHO-201ENST00000296271 APOBEC2Q9Y235 224 aaKnown RBP11.93□□□□□ -0.5
RHO-201ENST00000296271 THSD7BQ9C0I4 1608 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 CDH23Q9H251 3354 aa11.93□□□□□ -0.5
RHO-201ENST00000296271 MUSKO15146 869 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 ADAM12O43184 909 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 OAZ2O95190 189 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms