RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 MZT2BQ6NZ67 158 aa16.31■□□□□ 0.2
SSRP1-202ENST00000293880 PRMT6Q96LA8 375 aaPredicted RBP16.31■□□□□ 0.2
SSRP1-202ENST00000293880 A0A087WXM4 84 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 HNF4AP41235 474 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 GPR1P46091 355 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 MTX3Q5HYI7 312 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 ZFP1Q6P2D0 407 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 ERICH5Q6P6B1 374 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 HPS6Q86YV9 775 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 ZCCHC9Q8N567 271 aaKnown RBP16.3■□□□□ 0.2
SSRP1-202ENST00000293880 MROH8Q9H579 483 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 C17orf75Q9HAS0 396 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 ZNF446Q9NWS9 450 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 DGKBQ9Y6T7 804 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 GPR75-ASB3A0A0A6YYF3 556 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 GZMAP12544 262 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 BDNFP23560 247 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 LDLRAP1Q5SW96 308 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 TP53INP1Q96A56 240 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 LENG1Q96BZ8 264 aaPredicted RBP16.3■□□□□ 0.2
SSRP1-202ENST00000293880 SPG21Q9NZD8 308 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 ARHGAP28Q9P2N2 729 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 CPA4Q9UI42 421 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 RTN3O95197 1032 aaPredicted RBP16.3■□□□□ 0.2
SSRP1-202ENST00000293880 PRG2P13727 222 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 IL12AP29459 219 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 SAMD4BQ5PRF9 694 aaKnown RBP16.3■□□□□ 0.2
SSRP1-202ENST00000293880 CMTM6Q9NX76 183 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 GALNT8Q9NY28 637 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 COMMD9Q9P000 198 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 PTGFRNQ9P2B2 879 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 SMIM22K7EJ46 135 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 AVILO75366 819 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 PTGS2P35354 604 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 ABL2P42684 1182 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 SGCGQ13326 291 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 QPRTQ15274 297 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 USF2Q15853 346 aaPredicted RBP16.3■□□□□ 0.2
SSRP1-202ENST00000293880 LPCAT4Q643R3 524 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 FAM9CQ8IZT9 166 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 LSM14AQ8ND56 463 aaKnown RBP16.3■□□□□ 0.2
SSRP1-202ENST00000293880 AHCYL2Q96HN2 611 aaKnown RBP16.3■□□□□ 0.2
SSRP1-202ENST00000293880 TNKS2Q9H2K2 1166 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 C12orf4Q9NQ89 552 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 EGFL7Q9UHF1 273 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 BTN3A2P78410 334 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 GALNT3Q14435 633 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 GRIK4Q16099 956 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 CROCCP3Q8IVE0 287 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 NPAS2Q99743 824 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 TRPV5Q9NQA5 729 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 AHSPQ9NZD4 102 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 POLLQ9UGP5 575 aa16.3■□□□□ 0.2
SSRP1-202ENST00000293880 RIMS1Q86UR5 1692 aaKnown RBP16.3■□□□□ 0.2
SSRP1-202ENST00000293880 AP3D1O14617 1153 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 KPNA1P52294 538 aaPredicted RBP16.29■□□□□ 0.2
SSRP1-202ENST00000293880 MYBPC1Q00872 1141 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 MTAPQ13126 283 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 RFX4Q33E94 735 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 CLN6Q9NWW5 311 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 TEX28O15482 410 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 SERPINF2P08697 491 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 CCDC166P0CW27 439 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 TUFMP49411 452 aaKnown RBP16.29■□□□□ 0.2
SSRP1-202ENST00000293880 SPESP1Q6UW49 350 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 AKAP14Q86UN6 197 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 MNTQ99583 582 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 FSBPO95073 299 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 CST1P01037 141 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 USP46P62068 366 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 C1QBPQ07021 282 aaKnown RBP16.29■□□□□ 0.2
SSRP1-202ENST00000293880 FAM171A1Q5VUB5 890 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 KCTD4Q8WVF5 259 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 BHLHE41Q9C0J9 482 aaPredicted RBP16.29■□□□□ 0.2
SSRP1-202ENST00000293880 ZNF7P17097 686 aaPredicted RBP16.29■□□□□ 0.2
SSRP1-202ENST00000293880 IL18R1Q13478 541 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 DEF8Q6ZN54 512 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 CREG2Q8IUH2 290 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 BRSK2Q8IWQ3 736 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 TNS4Q8IZW8 715 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 ELMO1Q92556 727 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 EPB41L4BQ9H329 900 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 SLC26A3P40879 764 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 ITGA1P56199 1179 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 RPL38P63173 70 aaKnown RBP16.29■□□□□ 0.2
SSRP1-202ENST00000293880 THOC7Q6I9Y2 204 aaKnown RBP16.29■□□□□ 0.2
SSRP1-202ENST00000293880 ZNF613Q6PF04 617 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 FAM183BPQ6ZVS7 135 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 TRAPPC5Q8IUR0 188 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 GLIS3Q8NEA6 775 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 FNIP1Q8TF40 1166 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 EEF1AKMT1Q8WVE0 214 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 MAML3Q96JK9 1138 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 PRELID1Q9Y255 219 aa16.29■□□□□ 0.2
SSRP1-202ENST00000293880 RBAK-RBAKDNI3L0D1 243 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 VPS4BO75351 444 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 FBXW8Q8N3Y1 598 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 TLR10Q9BXR5 811 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 KPNA5O15131 536 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 IFI30P13284 250 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms