RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 CNTFP26441 200 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 CDH5P33151 784 aaPredicted RBP9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 ARPC4P59998 168 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 YBX1P67809 324 aaKnown RBP9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 TAP1Q03518 808 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 CLCQ05315 142 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 BFSP2Q13515 415 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 HERC3Q15034 1050 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 C15orf59Q2T9L4 293 aaPredicted RBP9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 SEL1L3Q68CR1 1132 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 LAYNQ6UX15 382 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 ERMP1Q7Z2K6 904 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 DCLK2Q8N568 766 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 ARNTL2Q8WYA1 636 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 LRRC39Q96DD0 335 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 PIWIL1Q96J94 861 aaKnown RBP9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 FAR2Q96K12 515 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 ZMAT2Q96NC0 199 aaKnown RBP9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 TCF12Q99081 682 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 C1orf50Q9BV19 199 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 MAGEB5Q9BZ81 275 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 LHPPQ9H008 270 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 DHX35Q9H5Z1 703 aaKnown RBP9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 AGO4Q9HCK5 861 aaKnown RBP9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 ANKMY1Q9P2S6 941 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 CD300AQ9UGN4 299 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 AP4E1Q9UPM8 1137 aa9.31□□□□□ -0.92
HMGCLL1-201ENST00000274901 TK2O00142 265 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 NFKBIEO00221 500 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 LYPLA2O95372 231 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 CPNE6O95741 557 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 EGFRP00533 1210 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 ELK4P28324 431 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 PSMD8P48556 350 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 RAD23AP54725 363 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 TGFB2P61812 414 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 OLIG2Q13516 323 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 LRP8Q14114 963 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 CA9Q16790 459 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 GLRA4Q5JXX5 417 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 XAF1Q6GPH4 301 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 XYLT1Q86Y38 959 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 CCDC60Q8IWA6 550 aaPredicted RBP9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 LSMEM2Q8N112 164 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 SAMD3Q8N6K7 520 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 PCDH19Q8TAB3 1148 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 ZFP90Q8TF47 636 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 DUS3LQ96G46 650 aaKnown RBP9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 RPL10LQ96L21 214 aaKnown RBP9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 RNF157Q96PX1 679 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 TP63Q9H3D4 680 aaPredicted RBP9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 AKIP1Q9NQ31 210 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 CISHQ9NSE2 258 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 TLL2Q9Y6L7 1015 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 ACOX3O15254 700 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 CLOCKO15516 846 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 SEC14L2O76054 403 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 TBXAS1P24557 533 aaPredicted RBP9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 MGAT1P26572 445 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 RPL14P50914 215 aaKnown RBP9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 HNRNPFP52597 415 aaKnown RBP9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 SESN2P58004 480 aaPredicted RBP9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 TRPC3Q13507 836 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 INSCQ1MX18 579 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 WDR78Q5VTH9 848 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 GTF2IRD2BQ6EKJ0 949 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 RNF19BQ6ZMZ0 732 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 PRR23BQ6ZRT6 265 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 GTF2IRD2Q86UP8 949 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 ANKRD13BQ86YJ7 626 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 CNTD1Q8N815 330 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 NETO2Q8NC67 525 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 CAPSLQ8WWF8 208 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 ZNF347Q96SE7 839 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 OSBPL10Q9BXB5 764 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 ILKAPQ9H0C8 392 aaPredicted RBP9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 ATP13A3Q9H7F0 1226 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 CACNA2D2Q9NY47 1150 aa9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 IFT80Q9P2H3 777 aaPredicted RBP9.3□□□□□ -0.92
HMGCLL1-201ENST00000274901 TNFRSF10AO00220 468 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 AURKAO14965 403 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 TRIM13O60858 407 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 S100BP04271 92 aaPredicted RBP9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 OXTRP30559 389 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 MAGEA12P43365 314 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 GRIA4P48058 902 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 MYL6P60660 151 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 FSTL1Q12841 308 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 E2F2Q14209 437 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 CDO1Q16878 200 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 TKFCQ3LXA3 575 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 CYBRD1Q53TN4 286 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 BSPRYQ5W0U4 402 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 PPP2R2DQ66LE6 453 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 REP15Q6BDI9 236 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 TMEM179Q6ZVK1 233 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 TMEM151AQ8N4L1 468 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 LRCH3Q96II8 777 aa9.29□□□□□ -0.92
HMGCLL1-201ENST00000274901 FCRL3Q96P31 734 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms