RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 PDP2Q9P2J9 529 aa19.36■□□□□ 0.69
CPNE7-201ENST00000268720 DCDC2Q9UHG0 476 aa19.36■□□□□ 0.69
CPNE7-201ENST00000268720 PADI3Q9ULW8 664 aa19.36■□□□□ 0.69
CPNE7-201ENST00000268720 POMPQ9Y244 141 aa19.36■□□□□ 0.69
CPNE7-201ENST00000268720 PTCH2Q9Y6C5 1203 aa19.36■□□□□ 0.69
CPNE7-201ENST00000268720 G3V2L1 256 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 FKBP6O75344 327 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 HCAR3P49019 387 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 RAB27AP51159 221 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 CDK18Q07002 472 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 PCSK7Q16549 785 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 GSTA3Q16772 222 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 SPANXN3Q5MJ09 141 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 PAOXQ6QHF9 649 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 DQX1Q8TE96 717 aaKnown RBP19.35■□□□□ 0.69
CPNE7-201ENST00000268720 BRD8Q9H0E9 1235 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 GBA3Q9H227 469 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 CASS4Q9NQ75 786 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 GSTT1P30711 240 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 GALNT2Q10471 571 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 CD300LGQ6UXG3 332 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 LDB1Q86U70 411 aaPredicted RBP19.35■□□□□ 0.69
CPNE7-201ENST00000268720 URGCPQ8TCY9 931 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 DPF3Q92784 378 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 PPP2R3CQ969Q6 453 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 TRAPPC9Q96Q05 1148 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 GCNAQ96QF7 691 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 NDNQ99608 321 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 RBBP8Q99708 897 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 CPNE1Q99829 537 aa19.35■□□□□ 0.69
CPNE7-201ENST00000268720 MTG1Q9BT17 334 aaPredicted RBP19.35■□□□□ 0.69
CPNE7-201ENST00000268720 PCSK1P29120 753 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 SERINC5Q86VE9 423 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 SNX32Q86XE0 403 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 SLC45A3Q96JT2 553 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 EPAS1Q99814 870 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 GIT1Q9Y2X7 761 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 CAPN8A6NHC0 703 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 NCAM2O15394 837 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 CCNT2O60583 730 aaKnown RBP19.34■□□□□ 0.69
CPNE7-201ENST00000268720 HNRNPLP14866 589 aaKnown RBP eCLIP19.34■□□□□ 0.694e-8■■■■■ 28.5
CPNE7-201ENST00000268720 THPOP40225 353 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 TRIM32Q13049 653 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 CNPY1Q3B7I2 92 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 SDHAF4Q5VUM1 108 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 APLFQ8IW19 511 aaPredicted RBP19.34■□□□□ 0.69
CPNE7-201ENST00000268720 VPS39Q96JC1 886 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 TEKT5Q96M29 485 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 ARHGAP39Q9C0H5 1083 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 SCN10AQ9Y5Y9 1956 aa19.34■□□□□ 0.69
CPNE7-201ENST00000268720 PMPCBO75439 489 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 ENO3P13929 434 aaPredicted RBP19.33■□□□□ 0.69
CPNE7-201ENST00000268720 GABRB3P28472 473 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 GRIA2P42262 883 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 MRPS22P82650 360 aaKnown RBP19.33■□□□□ 0.69
CPNE7-201ENST00000268720 MPP3Q13368 585 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 STXBP5Q5T5C0 1151 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 PM20D1Q6GTS8 502 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 FAM171BQ6P995 826 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 PGM2L1Q6PCE3 622 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 MFN1Q8IWA4 741 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 MFSD6LQ8IWD5 586 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 SFMBT1Q9UHJ3 866 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 ZDHHC2Q9UIJ5 367 aa19.33■□□□□ 0.69
CPNE7-201ENST00000268720 CAPN15O75808 1086 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 VAPBO95292 243 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 F9P00740 461 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 COX4I1P13073 169 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 CALRP27797 417 aaKnown RBP19.33■□□□□ 0.68
CPNE7-201ENST00000268720 SOX11P35716 441 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 SEPT6Q14141 434 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 INTS6LQ5JSJ4 861 aaKnown RBP19.33■□□□□ 0.68
CPNE7-201ENST00000268720 GRTP1Q5TC63 336 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 CEP97Q8IW35 865 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 TTC16Q8NEE8 873 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 NMRAL1Q9HBL8 299 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 CHST12Q9NRB3 414 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 SORCS3Q9UPU3 1222 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 NEU3Q9UQ49 428 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 SSX2IPQ9Y2D8 614 aa19.33■□□□□ 0.68
CPNE7-201ENST00000268720 OR6B1O95007 311 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 PGM3O95394 542 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 PIGNO95427 931 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 GRIA4P48058 902 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 LIMK2P53671 638 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 MGAT3Q09327 533 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 USP10Q14694 798 aaKnown RBP19.32■□□□□ 0.68
CPNE7-201ENST00000268720 RBBP5Q15291 538 aaKnown RBP19.32■□□□□ 0.68
CPNE7-201ENST00000268720 ARL13AQ5H913 290 aaPredicted RBP19.32■□□□□ 0.68
CPNE7-201ENST00000268720 ACTRT2Q8TDY3 377 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 TRIB2Q92519 343 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 KLHL4Q9C0H6 718 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 DNAJC28Q9NX36 388 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 C9JVG2 144 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 ODC1P11926 461 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 NELFEP18615 380 aaKnown RBP19.32■□□□□ 0.68
CPNE7-201ENST00000268720 MX2P20592 715 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 RPL9P32969 192 aaKnown RBP19.32■□□□□ 0.68
CPNE7-201ENST00000268720 CRHR2Q13324 411 aa19.32■□□□□ 0.68
CPNE7-201ENST00000268720 NAB1Q13506 487 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms