RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 STOX2Q9P2F5 926 aaPredicted RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 DMGDHQ9UI17 866 aaKnown RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 ZNF335Q9H4Z2 1342 aaPredicted RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 PTCH1Q13635 1447 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 RCAN1P53805 252 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 TNK2Q07912 1038 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 REPS1Q96D71 796 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 PLEKHF1Q96S99 279 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHFR-201ENST00000266880 TPP1O14773 563 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 NTSP30990 170 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 SLFN11Q7Z7L1 901 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 SLC47A2Q86VL8 602 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 KCNS3Q9BQ31 491 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 BOP1Q14137 746 aaKnown RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 GNA13Q14344 377 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 AENQ8WTP8 325 aaKnown RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 LRMDAQ9H2I8 198 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 GTF3C4Q9UKN8 822 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 OAS3Q9Y6K5 1087 aaKnown RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 TEX14Q8IWB6 1497 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 A0A096LPK6 155 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 ITGB3P05106 788 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 VDRP11473 427 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 ADRA1DP25100 572 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 FOXP4Q8IVH2 680 aaPredicted RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 NELL1Q92832 810 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 RHBGQ9H310 441 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 VPS4AQ9UN37 437 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 BTN3A1O00481 513 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 SSX5O60225 188 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 SLC11A2P49281 568 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 AGMOQ6ZNB7 445 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 METTL6Q8TCB7 284 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 UBQLN1Q9UMX0 589 aaKnown RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 TPPPO94811 219 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 PIGNO95427 931 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 CYP11B2P19099 503 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 TTC23Q5W5X9 447 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 DNAJB14Q8TBM8 379 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 PHF20Q9BVI0 1012 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 CCDC88CQ9P219 2028 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 MFSD14CQ5VZR4 134 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 ALYREFQ86V81 257 aaKnown RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 HGH1Q9BTY7 390 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 STN1Q9H668 368 aaKnown RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 EIF3KQ9UBQ5 218 aaKnown RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 USP21Q9UK80 565 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 SLC2A3P11169 496 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 CYP2C9P11712 490 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 PTENP60484 403 aa11.28□□□□□ -0.6
CHFR-201ENST00000266880 ZNF433Q8N7K0 673 aaPredicted RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 EIF1ADQ8N9N8 165 aaKnown RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 DCP1AQ9NPI6 582 aaPredicted RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 AKAP7Q9P0M2 348 aaPredicted RBP11.28□□□□□ -0.6
CHFR-201ENST00000266880 MBL2P11226 248 aaPredicted RBP11.27□□□□□ -0.6
CHFR-201ENST00000266880 ODC1P11926 461 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 DPYSQ14117 519 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 SYT12Q8IV01 421 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 TRIM43Q96BQ3 446 aaPredicted RBP11.27□□□□□ -0.6
CHFR-201ENST00000266880 NAT9Q9BTE0 207 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 TBC1D10AQ9BXI6 508 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 ADGRE3Q9BY15 652 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 RASSF1Q9NS23 344 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 NDOR1Q9UHB4 597 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 TBC1D30Q9Y2I9 924 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 GRIN2AQ12879 1464 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 DHRS12A0PJE2 317 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 BBOX1O75936 387 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 NTRK1P04629 796 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 MIB1Q86YT6 1006 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 SLC41A1Q8IVJ1 513 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 SEPT12Q8IYM1 358 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 UBE2J2Q8N2K1 259 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 C1GALT1C1Q96EU7 318 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 MTMR12Q9C0I1 747 aa11.27□□□□□ -0.6
CHFR-201ENST00000266880 OR2AT4A6NND4 320 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 PGRP06401 933 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 EIF4BP23588 611 aaKnown RBP11.27□□□□□ -0.61
CHFR-201ENST00000266880 EPHA7Q15375 998 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 DOK6Q6PKX4 331 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 DCP1BQ8IZD4 617 aaKnown RBP11.27□□□□□ -0.61
CHFR-201ENST00000266880 METTL8Q9H825 291 aaKnown RBP11.27□□□□□ -0.61
CHFR-201ENST00000266880 BCKDKO14874 412 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ITGB1P05556 798 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 DBIP07108 87 aaKnown RBP11.27□□□□□ -0.61
CHFR-201ENST00000266880 FSHRP23945 695 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ALDH4A1P30038 563 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 CBWD6Q4V339 395 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 FAM117BQ6P1L5 589 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 TMEM53Q6P2H8 277 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ANKRD23Q86SG2 305 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 GRHL1Q9NZI5 618 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 TMEM216Q9P0N5 145 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 VPS28Q9UK41 221 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 MAU2Q9Y6X3 613 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 DGAT1O75907 488 aa11.27□□□□□ -0.61
CHFR-201ENST00000266880 ATP5BP06576 529 aaKnown RBP11.27□□□□□ -0.61
CHFR-201ENST00000266880 SLC45A4Q5BKX6 768 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms