RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 AAR2Q9Y312 384 aaKnown RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 A0A0U1RQF3 1178 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 TK2O00142 265 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 LUC7L3O95232 432 aaKnown RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 HLA-DQB2P05538 268 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 ASGR1P07306 291 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 ATP6V1C1P21283 382 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 CCR1P32246 355 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 GLRBP48167 497 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 USP10Q14694 798 aaKnown RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 MAPRE1Q15691 268 aaKnown RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 C6orf163Q5TEZ5 329 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 LRRC74BQ6ZQY2 392 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SCD5Q86SK9 330 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 ZC3HC1Q86WB0 502 aaKnown RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 TDRD5Q8NAT2 981 aaKnown RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 PPHLN1Q8NEY8 458 aaKnown RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SREK1Q8WXA9 508 aaKnown RBP13.09□□□□□ -0.31
CPSF6-201ENST00000266679 HAPLN3Q96S86 360 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SMOC2Q9H3U7 446 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 CATSPERBQ9H7T0 1116 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 ABCC13Q9NSE7 274 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 SLC7A8Q9UHI5 535 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 TLK1Q9UKI8 766 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 TTC3P53804 2025 aa13.09□□□□□ -0.31
CPSF6-201ENST00000266679 LTBP2Q14767 1821 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 A0A1W2PQH9 124 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 TMEM114B3SHH9 223 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 AP3B1O00203 1094 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 FGF10O15520 208 aaPredicted RBP13.08□□□□□ -0.32
CPSF6-201ENST00000266679 SEPT4O43236 478 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 CACNG3O60359 315 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 MAFKO60675 156 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 TRIM13O60858 407 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 PMPCBO75439 489 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 MPSTP25325 297 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 CPOXP36551 454 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 CCR10P46092 362 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 COPAP53621 1224 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 EIF4EBP2Q13542 120 aaPredicted RBP13.08□□□□□ -0.32
CPSF6-201ENST00000266679 SLC9B1Q4ZJI4 515 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 SLC39A12Q504Y0 691 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 PCID2Q5JVF3 399 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 SDHAF4Q5VUM1 108 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 C1orf146Q5VVC0 180 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 KDELC2Q7Z4H8 507 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 C14orf80Q86SX3 495 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 SLC25A41Q8N5S1 370 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 KCTD4Q8WVF5 259 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 SUSD3Q96L08 255 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 TSNARE1Q96NA8 513 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 FCRL5Q96RD9 977 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 IL12RB2Q99665 862 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 GATA5Q9BWX5 397 aaPredicted RBP13.08□□□□□ -0.32
CPSF6-201ENST00000266679 ACE2Q9BYF1 805 aaPredicted RBP13.08□□□□□ -0.32
CPSF6-201ENST00000266679 RHOJQ9H4E5 214 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 COG4Q9H9E3 785 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 NMUR1Q9HB89 426 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 MAN1C1Q9NR34 630 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 NSMCE4AQ9NXX6 385 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 MPP6Q9NZW5 540 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 STX18Q9P2W9 335 aaKnown RBP13.08□□□□□ -0.32
CPSF6-201ENST00000266679 E9PAM4 449 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 E9PBE3 544 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 SOX1O00570 391 aaPredicted RBP13.08□□□□□ -0.32
CPSF6-201ENST00000266679 KLHL41O60662 606 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 ANXA9O76027 345 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 VAPBO95292 243 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 HOXC13P31276 330 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 CHRNA4P43681 627 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 TUBP50607 506 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 GEMP55040 296 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 ZNF33AQ06730 810 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 PEX6Q13608 980 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 SEPT6Q14141 434 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 ZNF460Q14592 562 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 KCNA10Q16322 511 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 TRMT5Q32P41 509 aaKnown RBP13.08□□□□□ -0.32
CPSF6-201ENST00000266679 ESRP1Q6NXG1 681 aaKnown RBP13.08□□□□□ -0.32
CPSF6-201ENST00000266679 DENND6AQ8IWF6 608 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 KLHDC8BQ8IXV7 354 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 UROC1Q96N76 676 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 C1QTNF1Q9BXJ1 281 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 C1orf21Q9H246 121 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 ATXN3LQ9H3M9 355 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 BATF3Q9NR55 127 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 ABI2Q9NYB9 513 aaPredicted RBP13.08□□□□□ -0.32
CPSF6-201ENST00000266679 SLC2A6Q9UGQ3 507 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 ANKRD6Q9Y2G4 727 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 HS3ST4Q9Y661 456 aa13.08□□□□□ -0.32
CPSF6-201ENST00000266679 TNFRSF10BO14763 440 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 MATN3O15232 486 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 B4GALT3O60512 393 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 ADAMTS4O75173 837 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 H2AFYO75367 372 aaKnown RBP13.07□□□□□ -0.32
CPSF6-201ENST00000266679 NEBLO76041 1014 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 CHRNGP07510 517 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms