RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SSNA1O43805 119 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 CD86P42081 329 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 MSLNQ13421 630 aaPredicted RBP18.19■□□□□ 0.5
COL5A3-201ENST00000264828 SQLEQ14534 574 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 DSG4Q86SJ6 1040 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ARMC8Q8IUR7 673 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 PWWP2AQ96N64 755 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 S100A13Q99584 98 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 SPG21Q9NZD8 308 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 C15orf38-AP3S2A0A0A6YYH1 394 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 CCDC182A6NF36 153 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 IL2P60568 153 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 CDC42P60953 191 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 USP46P62068 366 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 PARP6Q2NL67 630 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 BROXQ5VW32 411 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ARPINQ7Z6K5 226 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 PTGR2Q8N8N7 351 aaPredicted RBP18.19■□□□□ 0.5
COL5A3-201ENST00000264828 WDR60Q8WVS4 1066 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 CHID1Q9BWS9 393 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ZFP14Q9HCL3 533 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 CLIC5Q9NZA1 410 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 OGDHLQ9ULD0 1010 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 BTN3A3O00478 584 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 TP73O15350 636 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 SEC24AO95486 1093 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 NELFEP18615 380 aaKnown RBP18.19■□□□□ 0.5
COL5A3-201ENST00000264828 TOP3AQ13472 1001 aaPredicted RBP18.19■□□□□ 0.5
COL5A3-201ENST00000264828 NFE2Q16621 373 aaPredicted RBP18.19■□□□□ 0.5
COL5A3-201ENST00000264828 OTOP1Q7RTM1 612 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 KAT5Q92993 513 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ASB2Q96Q27 587 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 VPS35Q96QK1 796 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 IL17RBQ9NRM6 502 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ETAA1Q9NY74 926 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 SNX3O60493 162 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 RHAGQ02094 409 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 ARHGAP36Q6ZRI8 547 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 POPDC2Q9HBU9 364 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 ETS2P15036 469 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 PLD1Q13393 1074 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 SPIDRQ14159 915 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 PANX3Q96QZ0 392 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 TBC1D10AQ9BXI6 508 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 SH3GLB1Q9Y371 365 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 CASZ1Q86V15 1759 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 PDHXO00330 501 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 SNRPB2P08579 225 aaKnown RBP18.18■□□□□ 0.5
COL5A3-201ENST00000264828 MMP14P50281 582 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 AP5B1Q2VPB7 878 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 FNDC3BQ53EP0 1204 aaKnown RBP18.18■□□□□ 0.5
COL5A3-201ENST00000264828 SPESP1Q6UW49 350 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 TPGS1Q6ZTW0 290 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 CMTM6Q9NX76 183 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 H3BMM5 538 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 UNC5CO95185 931 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 SLC45A4Q5BKX6 768 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 ARMC12Q5T9G4 340 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 GPR107Q5VW38 600 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 TRAPPC5Q8IUR0 188 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 ULBP1Q9BZM6 244 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 ZNF446Q9NWS9 450 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 CLN6Q9NWW5 311 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 MAP10Q9P2G4 905 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 MTF2Q9Y483 593 aaPredicted RBP18.18■□□□□ 0.5
COL5A3-201ENST00000264828 DCDC2CA8MYV0 355 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 SMIM22K7EJ46 135 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 CHADO15335 359 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 ZBTB11O95625 1053 aaPredicted RBP18.18■□□□□ 0.5
COL5A3-201ENST00000264828 CYP2A6P11509 494 aaPredicted RBP18.18■□□□□ 0.5
COL5A3-201ENST00000264828 SLC26A2P50443 739 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 NAGLUP54802 743 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 CXCL9Q07325 125 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 AUHQ13825 339 aaKnown RBP18.18■□□□□ 0.5
COL5A3-201ENST00000264828 TOMM20Q15388 145 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 SETMARQ53H47 684 aaPredicted RBP18.18■□□□□ 0.5
COL5A3-201ENST00000264828 FNBP1LQ5T0N5 605 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 PSTKQ8IV42 348 aaKnown RBP18.18■□□□□ 0.5
COL5A3-201ENST00000264828 SAMD3Q8N6K7 520 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 PIWIL2Q8TC59 973 aaKnown RBP18.18■□□□□ 0.5
COL5A3-201ENST00000264828 PCDH12Q9NPG4 1184 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 COQ6Q9Y2Z9 468 aa18.18■□□□□ 0.5
COL5A3-201ENST00000264828 PSME3P61289 254 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 NT5DC1Q5TFE4 455 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 SLC27A1Q6PCB7 646 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 IFNLR1Q8IU57 520 aaPredicted RBP18.17■□□□□ 0.5
COL5A3-201ENST00000264828 PDE2AO00408 941 aaPredicted RBP18.17■□□□□ 0.5
COL5A3-201ENST00000264828 EML1O00423 815 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 JAK1P23458 1154 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 SHMT1P34896 483 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 ARF5P84085 180 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 RNF43Q68DV7 783 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 ABRAXAS1Q6UWZ7 409 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 SLC9A7Q96T83 725 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 ZCCHC2Q9C0B9 1178 aaKnown RBP18.17■□□□□ 0.5
COL5A3-201ENST00000264828 PAEPP09466 180 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 TNK2Q07912 1038 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 LPIN1Q14693 890 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 UNC5AQ6ZN44 842 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 DHDDSQ86SQ9 333 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms