RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 BRAFP15056 766 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 VCLP18206 1134 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 ATF6P18850 670 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 HOXA9P31269 272 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 RPS6KA2Q15349 733 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 PKDCCQ504Y2 493 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 SPANXN3Q5MJ09 141 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 LRIG3Q6UXM1 1119 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 PTAR1Q7Z6K3 402 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 CLP1Q92989 425 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 SH3KBP1Q96B97 665 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 ZNF689Q96CS4 500 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 MYO19Q96H55 970 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 RPL10LQ96L21 214 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 SLC13A1Q9BZW2 595 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 PIH1D1Q9NWS0 290 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 A8MX80 341 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 VPS26AO75436 327 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 TFE3P19532 575 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 VIPR2P41587 438 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 DRG2P55039 364 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 DLG2Q15700 870 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 SCARA3Q6AZY7 606 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 RIBC1Q8N443 379 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 ZCCHC9Q8N567 271 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 BCL7CQ8WUZ0 217 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 RILPQ96NA2 401 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 TTLL2Q9BWV7 592 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 POLMQ9NP87 494 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 ARIH1Q9Y4X5 557 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 ZNF487B1APH4 448 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 NDUFAB1O14561 156 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 MAP3K7O43318 606 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 SMIM24O75264 130 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 NR1D1P20393 614 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 PTPN7P35236 360 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 ABL2P42684 1182 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 SEC13P55735 322 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 SETMARQ53H47 684 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 DRICH1Q6PGQ1 229 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 SRLQ86TD4 932 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 FBF1Q8TES7 1133 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 HLA-CQ95604 372 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 TTC17Q96AE7 1141 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 PGAP3Q96FM1 320 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 SYT11Q9BT88 431 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 TNKS2Q9H2K2 1166 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 CDC42EP4Q9H3Q1 356 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 TMEM248Q9NWD8 314 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 TRMT6Q9UJA5 497 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 SLC39A10Q9ULF5 831 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 CHKBQ9Y259 395 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 RAI2Q9Y5P3 530 aa8.39□□□□□ -1.07
GTF3C3-201ENST00000263956 KDM1AO60341 852 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 VAPBO95292 243 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 NDST3O95803 873 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 MSH3P20585 1137 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 ADRA1DP25100 572 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 DUSP6Q16828 381 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 LONRF1Q17RB8 773 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 ATG16L1Q676U5 607 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 NCBP2-AS2Q69YL0 99 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 PDPK2PQ6A1A2 396 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 C14orf80Q86SX3 495 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 VN1R2Q8NFZ6 395 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 RAB3IL1Q8TBN0 382 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 PEBP4Q96S96 227 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 SPATA16Q9BXB7 569 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 C1orf232A0A0U1RR37 186 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 WDR91A4D1P6 747 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 GPC4O75487 556 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 ZNF7P17097 686 aaPredicted RBP8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 CEBPBP17676 345 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 IGFBP6P24592 240 aaPredicted RBP8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 GNGT1P63211 74 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 SCAPQ12770 1279 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 PAFAH1B3Q15102 231 aaKnown RBP8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 C2orf27AQ580R0 203 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 THEMIS2Q5TEJ8 643 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 POTEHQ6S545 545 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 RGL4Q8IZJ4 473 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 DCAF4L2Q8NA75 395 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 FLCNQ8NFG4 579 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 ST13P5Q8NFI4 369 aaPredicted RBP8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 SHKBP1Q8TBC3 707 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 TEKT5Q96M29 485 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 SLC2A11Q9BYW1 496 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 GBA3Q9H227 469 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 TRABDQ9H4I3 376 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 DNMT3BQ9UBC3 853 aaKnown RBP8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 INSIG1O15503 277 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 SH3BP5O60239 455 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 GCATO75600 419 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 CNTN5O94779 1100 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 CHEK2O96017 543 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 AGTP01019 485 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 LPOP22079 712 aaPredicted RBP8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 PTPN3P26045 913 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms