RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 FCRL4Q96PJ5 515 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 GPRC5CQ9NQ84 441 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 SNTG2Q9NY99 539 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 DAGLAQ9Y4D2 1042 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 NLRP1Q9C000 1473 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 CSDE1O75534 798 aaKnown RBP11.5□□□□□ -0.57
PTPN4-201ENST00000263708 MATN4O95460 622 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 UBE2E3Q969T4 207 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 ANKEF1Q9NU02 776 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 MYH11P35749 1972 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 DBTP11182 482 aaKnown RBP11.5□□□□□ -0.57
PTPN4-201ENST00000263708 CXCR2P25025 360 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 SLC26A11Q86WA9 606 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 CCDC36Q8IYA8 594 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 RXFP2Q8WXD0 754 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 CDHR5Q9HBB8 845 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 ZFP14Q9HCL3 533 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 RABGEF1Q9UJ41 708 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 MAPRE3Q9UPY8 281 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 CORO2BQ9UQ03 480 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 TRAV19A0A0A6YYK7 116 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 RGS10O43665 173 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 ZIK1Q3SY52 487 aaPredicted RBP11.5□□□□□ -0.57
PTPN4-201ENST00000263708 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.5□□□□□ -0.57
PTPN4-201ENST00000263708 POU5F2Q8N7G0 328 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 NELL1Q92832 810 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 MTA3Q9BTC8 594 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 CDH9Q9ULB4 789 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 PCDHA11Q9Y5I1 949 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 PGRMC2O15173 223 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 USP17L7P0C7H9 530 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 CYP11B1P15538 503 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 HTR1BP28222 390 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 SLC39A12Q504Y0 691 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 FNBP1LQ5T0N5 605 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 ARHGEF19Q8IW93 802 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 RASSF5Q8WWW0 418 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 S100ZQ8WXG8 99 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 TAAR1Q96RJ0 339 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 ARHGEF40Q8TER5 1519 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 MRASO14807 208 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 FFAR3O14843 346 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 GPR42O15529 346 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 RB1P06400 928 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 DGKAP23743 735 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 GALK1P51570 392 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 ADARP55265 1226 aaKnown RBP11.5□□□□□ -0.57
PTPN4-201ENST00000263708 CDH17Q12864 832 aa11.5□□□□□ -0.57
PTPN4-201ENST00000263708 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 PDHBP11177 359 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 HSPA14Q0VDF9 509 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 ITGB3BPQ13352 177 aaPredicted RBP11.49□□□□□ -0.57
PTPN4-201ENST00000263708 CCNG2Q16589 344 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 ZNF549Q6P9A3 640 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 RFT1Q96AA3 541 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 MCCC1Q96RQ3 725 aaPredicted RBP11.49□□□□□ -0.57
PTPN4-201ENST00000263708 IFT46Q9NQC8 304 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 TIMM8BQ9Y5J9 83 aaPredicted RBP11.49□□□□□ -0.57
PTPN4-201ENST00000263708 UGGT1Q9NYU2 1555 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 ZNF806P0C7X5 589 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 NAMPTP43490 491 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 NFE2Q16621 373 aaPredicted RBP11.49□□□□□ -0.57
PTPN4-201ENST00000263708 CDC42EP5Q6NZY7 148 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 SAMD7Q7Z3H4 446 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 NKD1Q969G9 470 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 ATG4CQ96DT6 458 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 VCPKMTQ9H867 229 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 DNAJC11Q9NVH1 559 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 INTS10Q9NVR2 710 aaKnown RBP11.49□□□□□ -0.57
PTPN4-201ENST00000263708 GMPPBQ9Y5P6 360 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 METP08581 1390 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 MED24O75448 989 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 C5orf22Q49AR2 442 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 SNX20Q7Z614 316 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 DEFB129Q9H1M3 183 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 ABCG8Q9H221 673 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 MROH7Q68CQ1 1323 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 FAM86B2P0C5J1 330 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 CYP4B1P13584 511 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 PGAM1P18669 254 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 MMP13P45452 471 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 MTTPP55157 894 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 NR1D2Q14995 579 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 XKR6Q5GH73 641 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 SULT1C3Q6IMI6 304 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 CXorf57Q6NSI4 855 aaKnown RBP11.49□□□□□ -0.57
PTPN4-201ENST00000263708 PIH1D2Q8WWB5 315 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 BRINP2Q9C0B6 783 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 AGPAT3Q9NRZ7 376 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 GRIP1Q9Y3R0 1128 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 ARL5CA6NH57 179 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 UBE2Q2LH0YL09 131 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 PON1P27169 355 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 SLC26A3P40879 764 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 MAGEA2P43356 314 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 GJA8P48165 433 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 CHST4Q8NCG5 386 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 MYOCQ99972 504 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 AIFM2Q9BRQ8 373 aa11.49□□□□□ -0.57
PTPN4-201ENST00000263708 ATG10Q9H0Y0 220 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms