RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 KIAA1549LQ6ZVL6 1849 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 GOLGA6CA6NDK9 693 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 GOLGA6BA6NDN3 693 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 GRXCR2A6NFK2 248 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 OTOL1A6NHN0 477 aaPredicted RBP23.04■■□□□ 1.28
UFD1-201ENST00000263202 MAP2K7O14733 419 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 EIF3HO15372 352 aaKnown RBP eCLIP23.04■■□□□ 1.28
UFD1-201ENST00000263202 PSMD3O43242 534 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 AVILO75366 819 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 SASH3O75995 380 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 GOLGA6DP0CG33 693 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 PABPC1P11940 636 aaKnown RBP23.04■■□□□ 1.28
UFD1-201ENST00000263202 PSMC3P17980 439 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 SARNPP82979 210 aaKnown RBP23.04■■□□□ 1.28
UFD1-201ENST00000263202 DSC2Q02487 901 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 PDIA2Q13087 525 aaKnown RBP23.04■■□□□ 1.28
UFD1-201ENST00000263202 MTM1Q13496 603 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 GRM2Q14416 872 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 SPARCL1Q14515 664 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 INO80DQ53TQ3 878 aaPredicted RBP23.04■■□□□ 1.28
UFD1-201ENST00000263202 KIAA0907Q7Z7F0 614 aaPredicted RBP23.04■■□□□ 1.28
UFD1-201ENST00000263202 ARRDC2Q8TBH0 407 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 MGME1Q9BQP7 344 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 ECT2Q9H8V3 914 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 GOLGA6AQ9NYA3 693 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 EPS15L1Q9UBC2 864 aa23.04■■□□□ 1.28
UFD1-201ENST00000263202 ECI2O75521 394 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 BANF1O75531 89 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 MMP2P08253 660 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 MAGEA3P43357 314 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 MAGEA4P43358 317 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 GEMP55040 296 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 OLIG2Q13516 323 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 FASTKD3Q14CZ7 662 aaKnown RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 SPDYCQ5MJ68 293 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 ALG1LQ6GMV1 187 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 RETSATQ6NUM9 610 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 PRPF39Q86UA1 669 aaKnown RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 YAF2Q8IY57 180 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.03■■□□□ 1.28
UFD1-201ENST00000263202 UBLCP1Q8WVY7 318 aaPredicted RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 XPO6Q96QU8 1125 aaKnown RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 EPB41L4BQ9H329 900 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 UBE2ZQ9H832 354 aaPredicted RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 LRRC40Q9H9A6 602 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 XAB2Q9HCS7 855 aaKnown RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 HAUS2Q9NVX0 235 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 TTC24A2A3L6 582 aaPredicted RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 ALOX15BO15296 676 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 TMCC1O94876 653 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 MT-CO1P00395 513 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 MLNP12872 115 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 GAB4Q2WGN9 574 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 UBAP2Q5T6F2 1119 aaKnown RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 LRRC8BQ6P9F7 803 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 TRMT10CQ7L0Y3 403 aaKnown RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 C12orf40Q86WS4 652 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 TADA1Q96BN2 335 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 RPP25Q9BUL9 199 aaKnown RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 PABPC3Q9H361 631 aaKnown RBP23.03■■□□□ 1.28
UFD1-201ENST00000263202 XIRP2A4UGR9 3374 aa23.03■■□□□ 1.28
UFD1-201ENST00000263202 CXorf51AA0A1B0GTR3 108 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 TRIM24O15164 1050 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 ATP8B1O43520 1251 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 CISD3P0C7P0 127 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 KCNA5P22460 613 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 GEMIN4P57678 1058 aaKnown RBP23.02■■□□□ 1.28
UFD1-201ENST00000263202 DMC1Q14565 340 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 IHHQ14623 411 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 BBS9Q3SYG4 887 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 HP1BP3Q5SSJ5 553 aaPredicted RBP23.02■■□□□ 1.28
UFD1-201ENST00000263202 GPR153Q6NV75 609 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 MTSS1LQ765P7 747 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 ETFBKMTQ8IXQ9 262 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 ZBED8Q8IZ13 594 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 AGGF1Q8N302 714 aaeCLIP23.02■■□□□ 1.28
UFD1-201ENST00000263202 SEMA3CQ99985 751 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 WDR83Q9BRX9 315 aaKnown RBP23.02■■□□□ 1.28
UFD1-201ENST00000263202 ANKRD36A6QL64 1941 aa23.02■■□□□ 1.28
UFD1-201ENST00000263202 USP12O75317 370 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 GJB3O75712 270 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 SP100P23497 879 aaPredicted RBP23.01■■□□□ 1.27
UFD1-201ENST00000263202 CD86P42081 329 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 RGRP47804 291 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 SERPINH1P50454 418 aaKnown RBP23.01■■□□□ 1.27
UFD1-201ENST00000263202 MPP3Q13368 585 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 KDELC1Q6UW63 502 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 ADIPOR2Q86V24 386 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 C9orf72Q96LT7 481 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 VIPAS39Q9H9C1 493 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 NINJ2Q9NZG7 142 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 K7ERQ8 282 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 RIPK2O43353 540 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 PMPCBO75439 489 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 CR2P20023 1033 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 CTSOP43234 321 aaPredicted RBP23.01■■□□□ 1.27
UFD1-201ENST00000263202 DGKGP49619 791 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 SKOR1P84550 965 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 RUNX3Q13761 415 aa23.01■■□□□ 1.27
UFD1-201ENST00000263202 KYNUQ16719 465 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms