RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 FAM72AQ5TYM5 149 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 FAM72DQ6L9T8 149 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 HMBOX1Q6NT76 420 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 TTC33Q6PID6 262 aaPredicted RBP16.12■□□□□ 0.17
LMNB1-201ENST00000261366 CLEC14AQ86T13 490 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 TMEM110Q86TL2 294 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 FAM72BQ86X60 149 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 OFCC1Q8IZS5 231 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 NAT9Q9BTE0 207 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 FTHL17Q9BXU8 183 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 ARMC7Q9H6L4 198 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 EGFL7Q9UHF1 273 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 CNOT6Q9ULM6 557 aaKnown RBP16.12■□□□□ 0.17
LMNB1-201ENST00000261366 TNFSF13BQ9Y275 285 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 COL11A1P12107 1806 aaPredicted RBP16.12■□□□□ 0.17
LMNB1-201ENST00000261366 GIPC1O14908 333 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 ARF4P18085 180 aaPredicted RBP16.12■□□□□ 0.17
LMNB1-201ENST00000261366 VARSP26640 1264 aaKnown RBP16.12■□□□□ 0.17
LMNB1-201ENST00000261366 ATP1A4Q13733 1029 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 PRPSAP1Q14558 356 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 GPR107Q5VW38 600 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 OGFOD2Q6N063 350 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 CANT1Q8WVQ1 401 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 ISOC1Q96CN7 298 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 THAP11Q96EK4 314 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 SPATA33Q96N06 139 aa16.12■□□□□ 0.17
LMNB1-201ENST00000261366 SOX17Q9H6I2 414 aaPredicted RBP16.12■□□□□ 0.17
LMNB1-201ENST00000261366 PSMD12O00232 456 aaPredicted RBP16.11■□□□□ 0.17
LMNB1-201ENST00000261366 LMO2P25791 158 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 YAP1P46937 504 aaKnown RBP16.11■□□□□ 0.17
LMNB1-201ENST00000261366 SULT2A1Q06520 285 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 ZNF618Q5T7W0 954 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 ZYG11AQ6WRX3 759 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 CTU1Q7Z7A3 348 aaKnown RBP16.11■□□□□ 0.17
LMNB1-201ENST00000261366 CARM1Q86X55 608 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 SMYD1Q8NB12 490 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 CYGBQ8WWM9 190 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 ASB9Q96DX5 294 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 SLC45A3Q96JT2 553 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 ZNF597Q96LX8 424 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 OSBPL11Q9BXB4 747 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 NAA50Q9GZZ1 169 aaKnown RBP16.11■□□□□ 0.17
LMNB1-201ENST00000261366 PDZD7Q9H5P4 517 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 TNFRSF12AQ9NP84 129 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 PFDN4Q9NQP4 134 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 BLOC1S6Q9UL45 172 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 SNX10Q9Y5X0 201 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 NUP205Q92621 2012 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 FAM163BP0C2L3 166 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 SETSIPP0DME0 302 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 INCA1Q0VD86 236 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 ELMSAN1Q6PJG2 1045 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 CNSTQ6PJW8 725 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 CHSY3Q70JA7 882 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 SETD3Q86TU7 594 aaPredicted RBP16.11■□□□□ 0.17
LMNB1-201ENST00000261366 CBR4Q8N4T8 237 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 C18orf25Q96B23 403 aaPredicted RBP16.11■□□□□ 0.17
LMNB1-201ENST00000261366 TUT1Q9H6E5 874 aaKnown RBP16.11■□□□□ 0.17
LMNB1-201ENST00000261366 PRDM16Q9HAZ2 1276 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 CHST12Q9NRB3 414 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 PNPLA3Q9NST1 481 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.11■□□□□ 0.178e-15■■□□□ 13.2
LMNB1-201ENST00000261366 ZNF112Q9UJU3 913 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 USP3Q9Y6I4 520 aa16.11■□□□□ 0.17
LMNB1-201ENST00000261366 A0A1W2PPW3 197 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 HEATR9A2RTY3 570 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 SOWAHBA6NEL2 793 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 DDHD2O94830 711 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 MT-ND1P03886 318 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 MCF2P10911 925 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 SLC7A2P52569 658 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 GJA9P57773 515 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 NSUN2Q08J23 767 aaKnown RBP eCLIP16.1■□□□□ 0.17
LMNB1-201ENST00000261366 CBLBQ13191 982 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 FASTKQ14296 549 aaKnown RBP16.1■□□□□ 0.17
LMNB1-201ENST00000261366 BORAQ6PGQ7 559 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 METTL7BQ6UX53 244 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 CEP97Q8IW35 865 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 TMEM151AQ8N4L1 468 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 LZICQ8WZA0 190 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 KLRG1Q96E93 195 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 PHF21BQ96EK2 531 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 LRCH3Q96II8 777 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 RANBP9Q96S59 729 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 OSBPL6Q9BZF3 934 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 CLK4Q9HAZ1 481 aaKnown RBP16.1■□□□□ 0.17
LMNB1-201ENST00000261366 FBRSL1Q9HCM7 1045 aaKnown RBP16.1■□□□□ 0.17
LMNB1-201ENST00000261366 SH3GLB1Q9Y371 365 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 V9GYQ6 96 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 ANKRD12Q6UB98 2062 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 J3QRK9 145 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 M0QYT0 321 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 FBP2O00757 339 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 SDHDO14521 159 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 TIMM44O43615 452 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 GPC4O75487 556 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 ATE1O95260 518 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 SLC35E2BP0CK96 405 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 PTPN3P26045 913 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms