RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CERS4Q9HA82 394 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 TXNRD2Q9NNW7 524 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 TDP1Q9NUW8 608 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 ADAMTS5Q9UNA0 930 aa13.6□□□□□ -0.23
PRPF38A-201ENST00000257181 NCANO14594 1321 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 F5H423 210 aaPredicted RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 ENO3P13929 434 aaPredicted RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 CHI3L1P36222 383 aaPredicted RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 NEK3P51956 506 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 MUM1Q2TAK8 710 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 NAF1Q96HR8 494 aaKnown RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 PLEKHA8Q96JA3 519 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 ERVK-5Q9HDB9 667 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 IARS2Q9NSE4 1012 aaKnown RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 SCML2Q9UQR0 700 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 TDRKHQ9Y2W6 561 aaKnown RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 MTO1Q9Y2Z2 717 aaKnown RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 AGXTP21549 392 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 CASRP41180 1078 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 CSE1LP55060 971 aaKnown RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 TAS2R50P59544 299 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 DNAL1Q4LDG9 190 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 WDR59Q6PJI9 974 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 SH3RF2Q8TEC5 729 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 ASZ1Q8WWH4 475 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 TNFRSF25Q93038 417 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 FCRL2Q96LA5 508 aaPredicted RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 OSBPL2Q9H1P3 480 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 COL20A1Q9P218 1284 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 PCNAP12004 261 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 LRPAP1P30533 357 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 SPAM1P38567 509 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 TNFSF9P41273 254 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 SPIDRQ14159 915 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 CRY1Q16526 586 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 BRAT1Q6PJG6 821 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 MPP5Q8N3R9 675 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 USP7Q93009 1102 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 HLA-CQ95604 372 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 GDE1Q9NZC3 331 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 PCDHGB3Q9Y5G1 929 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 PAGE1O75459 146 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 C1RP00736 705 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 PBX3P40426 434 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 ANKMY2Q8IV38 441 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 SIPA1Q96FS4 1042 aa13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 EIF2AQ9BY44 585 aaKnown RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 SPATA6Q9NWH7 488 aaPredicted RBP13.59□□□□□ -0.23
PRPF38A-201ENST00000257181 C5orf60A6NFR6 353 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 TM7SF2O76062 418 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 C4BPAP04003 597 aaKnown RBP13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 GSTM1P09488 218 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 CMPK1P30085 196 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 GSTM4Q03013 218 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 TAPT1Q6NXT6 567 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 VITQ6UXI7 678 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 DSELQ8IZU8 1212 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 BTN2A2Q8WVV5 523 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 GPATCH2LQ9NWQ4 482 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 CAPN7Q9Y6W3 813 aa13.58□□□□□ -0.23
PRPF38A-201ENST00000257181 C9J4A7 227 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 PJA2O43164 708 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 RGS14O43566 566 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 AMPD1P23109 780 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 PTPN7P35236 360 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 CARD16Q5EG05 197 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 KCNMB4Q86W47 210 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 SPATA17Q96L03 361 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 SPATA5L1Q9BVQ7 753 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 ZFP69BQ9UJL9 534 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 TMEM150BA6NC51 233 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 STXBP5Q5T5C0 1151 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 LCA5Q86VQ0 697 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 TC2NQ8N9U0 490 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 NTAN1Q96AB6 310 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 PYCARDQ9ULZ3 195 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 SNED1Q8TER0 1413 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 RASSF9O75901 435 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 ENDOD1O94919 500 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 ZNF30P17039 623 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 RPL26P61254 145 aaKnown RBP13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 HSF5Q4G112 596 aaPredicted RBP13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 CELF6Q96J87 481 aaKnown RBP13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 IL25Q9H293 177 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 RPL26L1Q9UNX3 145 aaKnown RBP13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 USP54Q70EL1 1684 aa13.58□□□□□ -0.24
PRPF38A-201ENST00000257181 SYNDIG1LA6NDD5 238 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 KCNU1A8MYU2 1149 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 SLC11A1P49279 550 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 GNA12Q03113 381 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 ZBTB17Q13105 803 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 PRMT9Q6P2P2 845 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 CRYBG2Q8N1P7 616 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 FERD3LQ96RJ6 166 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 P2RY13Q9BPV8 354 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 TTLL2Q9BWV7 592 aa13.57□□□□□ -0.24
PRPF38A-201ENST00000257181 HCN3Q9P1Z3 774 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms