RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 XPO4Q9C0E2 1151 aaKnown RBP14.12□□□□□ -0.15
DDX39A-201ENST00000242776 MUC3BQ9H195 1237 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 TNKS2Q9H2K2 1166 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 DYRK4Q9NR20 520 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.12□□□□□ -0.15
DDX39A-201ENST00000242776 SLC12A6Q9UHW9 1150 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 IPO11Q9UI26 975 aaKnown RBP14.12□□□□□ -0.15
DDX39A-201ENST00000242776 ENTPD2Q9Y5L3 495 aa14.12□□□□□ -0.15
DDX39A-201ENST00000242776 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.11□□□□□ -0.15
DDX39A-201ENST00000242776 A0A1W2PQC6 194 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 POM121BA6NF01 834 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 E5RJQ4 531 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 MUSKO15146 869 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 TNFSF15O95150 251 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 GP1BAP07359 652 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 KRT5P13647 590 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 RRM1P23921 792 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 CHRNA3P32297 505 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 PLK1P53350 603 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 ZNF177Q13360 481 aaPredicted RBP14.11□□□□□ -0.15
DDX39A-201ENST00000242776 NR1I3Q14994 352 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 ARSIQ5FYB1 569 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 PERM1Q5SV97 790 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 LINGO4Q6UY18 593 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 ZNF548Q8NEK5 533 aaPredicted RBP14.11□□□□□ -0.15
DDX39A-201ENST00000242776 ANP32BQ92688 251 aaKnown RBP14.11□□□□□ -0.15
DDX39A-201ENST00000242776 PCMTD1Q96MG8 357 aaPredicted RBP14.11□□□□□ -0.15
DDX39A-201ENST00000242776 SLC46A1Q96NT5 459 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 ERGIC2Q96RQ1 377 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 EVA1BQ9NVM1 165 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 DDIT4Q9NX09 232 aa14.11□□□□□ -0.15
DDX39A-201ENST00000242776 A6NNZ2 444 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 RAD51BO15315 384 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 GRAP2O75791 330 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 SRCP12931 536 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 GPD2P43304 727 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 HNRNPKP61978 463 aaKnown RBP eCLIP14.1□□□□□ -0.15
DDX39A-201ENST00000242776 NME3Q13232 169 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 SRSF6Q13247 344 aaKnown RBP14.1□□□□□ -0.15
DDX39A-201ENST00000242776 CLN3Q13286 438 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 C1orf61Q13536 156 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 AUHQ13825 339 aaKnown RBP14.1□□□□□ -0.15
DDX39A-201ENST00000242776 FZD2Q14332 565 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 STILQ15468 1287 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 C14orf80Q86SX3 495 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 EXD3Q8N9H8 876 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 EHBP1Q8NDI1 1231 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 PRR11Q96HE9 360 aaPredicted RBP14.1□□□□□ -0.15
DDX39A-201ENST00000242776 MRFAP1L1Q96HT8 127 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 BMFQ96LC9 184 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 DUSP23Q9BVJ7 150 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 INTS2Q9H0H0 1204 aaKnown RBP14.1□□□□□ -0.15
DDX39A-201ENST00000242776 SIK2Q9H0K1 926 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 POPDC2Q9HBU9 364 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.1□□□□□ -0.157e-6■□□□□ 10.1
DDX39A-201ENST00000242776 KLF15Q9UIH9 416 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 DAAM1Q9Y4D1 1078 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 FARP1Q9Y4F1 1045 aaPredicted RBP14.1□□□□□ -0.15
DDX39A-201ENST00000242776 SNX10Q9Y5X0 201 aa14.1□□□□□ -0.15
DDX39A-201ENST00000242776 ALOX15BO15296 676 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 TEX33O43247 280 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 SART1O43290 800 aaKnown RBP14.09□□□□□ -0.15
DDX39A-201ENST00000242776 SMAD6O43541 496 aaKnown RBP14.09□□□□□ -0.15
DDX39A-201ENST00000242776 PAK4O96013 591 aaPredicted RBP14.09□□□□□ -0.15
DDX39A-201ENST00000242776 ACADSBP45954 432 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 YWHAZP63104 245 aaKnown RBP14.09□□□□□ -0.15
DDX39A-201ENST00000242776 FGL2Q14314 439 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 SYCP1Q15431 976 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 TCEA2Q15560 299 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 TTC39BQ5VTQ0 682 aaPredicted RBP14.09□□□□□ -0.15
DDX39A-201ENST00000242776 ZCCHC8Q6NZY4 707 aaKnown RBP14.09□□□□□ -0.15
DDX39A-201ENST00000242776 RBM44Q6ZP01 1051 aaKnown RBP14.09□□□□□ -0.15
DDX39A-201ENST00000242776 ABI3BPQ7Z7G0 1075 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 DEFB106AQ8N104 65 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 NEK11Q8NG66 645 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 OR2A12Q8NGT7 310 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 IQCDQ96DY2 449 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 FAM81BQ96LP2 452 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 CRACR2AQ9BSW2 395 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 ACP6Q9NPH0 428 aa14.09□□□□□ -0.15
DDX39A-201ENST00000242776 AQP9O43315 295 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 CNTN5O94779 1100 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 IGLV3-25P01717 112 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 RHOCP08134 193 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 JUNDP17535 347 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 PON1P27169 355 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 DNA2P51530 1060 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 ZNF75DP51815 510 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 OXCT1P55809 520 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 CDK17Q00537 523 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 PDE1CQ14123 709 aaPredicted RBP14.08□□□□□ -0.16
DDX39A-201ENST00000242776 NR0B2Q15466 257 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 TPRG1LQ5T0D9 272 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 TRIM65Q6PJ69 517 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 ERN2Q76MJ5 926 aaKnown RBP14.08□□□□□ -0.16
DDX39A-201ENST00000242776 JAMLQ86YT9 394 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 RBFAQ8N0V3 343 aa14.08□□□□□ -0.16
DDX39A-201ENST00000242776 SNRNP27Q8WVK2 155 aaKnown RBP14.08□□□□□ -0.16
DDX39A-201ENST00000242776 CCDC97Q96F63 343 aaPredicted RBP14.08□□□□□ -0.16
DDX39A-201ENST00000242776 PSMB7Q99436 277 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms