RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 USP12O75317 370 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 GNRH1P01148 92 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 GYPCP04921 128 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
NEK9-201ENST00000238616 S100A1P23297 94 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 CRABP2P29373 138 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 UGT1A5P35504 534 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 RCAN1P53805 252 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 TBX2Q13207 712 aaPredicted RBP13.35□□□□□ -0.27
NEK9-201ENST00000238616 ZIK1Q3SY52 487 aaPredicted RBP13.35□□□□□ -0.27
NEK9-201ENST00000238616 PLPP4Q5VZY2 271 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 TMED8Q6PL24 325 aaPredicted RBP13.35□□□□□ -0.27
NEK9-201ENST00000238616 CASKIN2Q8WXE0 1202 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 TMEM237Q96Q45 408 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 ZNF879B4DU55 563 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 LSM3P62310 102 aaKnown RBP13.35□□□□□ -0.27
NEK9-201ENST00000238616 SPIBQ01892 262 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 GFOD2Q3B7J2 385 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 MZT2AQ6P582 158 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 FAM129CQ86XR2 697 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 IGDCC4Q8TDY8 1250 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 TAGLN3Q9UI15 199 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 SLC12A4Q9UP95 1085 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 DUSP10Q9Y6W6 482 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 A0A1B0GTH6 734 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 FAM91A1Q658Y4 838 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 SPOCD1Q6ZMY3 1216 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 ALLCQ8N6M5 410 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 BPIFB6Q8NFQ5 453 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 ZNF483Q8TF39 744 aaPredicted RBP13.35□□□□□ -0.27
NEK9-201ENST00000238616 VPS35Q96QK1 796 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 ACAT2Q9BWD1 397 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 CERS4Q9HA82 394 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 MARCH2Q9P0N8 246 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 CKLFQ9UBR5 152 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 NOS1APO75052 506 aaPredicted RBP13.35□□□□□ -0.27
NEK9-201ENST00000238616 TSPAN8P19075 237 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 EIF4BP23588 611 aaKnown RBP13.35□□□□□ -0.27
NEK9-201ENST00000238616 RPS12P25398 132 aaKnown RBP13.35□□□□□ -0.27
NEK9-201ENST00000238616 CRADDP78560 199 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 GPR152Q8TDT2 470 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 ANKS1AQ92625 1134 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 NMRAL1Q9HBL8 299 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 DNMT3LQ9UJW3 386 aa13.35□□□□□ -0.27
NEK9-201ENST00000238616 RIMS1Q86UR5 1692 aaKnown RBP13.34□□□□□ -0.27
NEK9-201ENST00000238616 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 H3BNH8 94 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 PCCBP05166 539 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CCNA2P20248 432 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 MC1RQ01726 317 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CCNI2Q6ZMN8 369 aaPredicted RBP13.34□□□□□ -0.27
NEK9-201ENST00000238616 DEF8Q6ZN54 512 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 LRRC34Q8IZ02 419 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 C17orf75Q9HAS0 396 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 SSU72P8A0A1W2PR75 194 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 SLCO1B7G3V0H7 640 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CYP4B1P13584 511 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.34□□□□□ -0.27
NEK9-201ENST00000238616 ZCCHC23Q6ZST2 131 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CD302Q8IX05 232 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 OR4A15Q8NGL6 344 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 FRMD8Q9BZ67 464 aaPredicted RBP13.34□□□□□ -0.27
NEK9-201ENST00000238616 USP20Q9Y2K6 914 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 FFAR2O15552 330 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ACADSP16219 412 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 AMPD1P23109 780 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 MYL9P24844 172 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ZNF276Q8N554 614 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 NAT9Q9BTE0 207 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 BATF3Q9NR55 127 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ELOVL2Q9NXB9 296 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 FZD1Q9UP38 647 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 MAGEB16A2A368 324 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 DCXO43602 365 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 LDLRP01130 860 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 KCNA5P22460 613 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CES1P23141 567 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CCL23P55773 120 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 PRAMEF19Q5SWL8 479 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 WDR93Q6P2C0 686 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 SLC2A14Q8TDB8 520 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 MAML3Q96JK9 1138 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 OSER1Q9NX31 292 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 IKZF3Q9UKT9 509 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 SLC27A6Q9Y2P4 619 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 RSL1D1O76021 490 aaKnown RBP13.34□□□□□ -0.27
NEK9-201ENST00000238616 RLN1P04808 185 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ATP5C1P36542 298 aaKnown RBP13.34□□□□□ -0.27
NEK9-201ENST00000238616 STAT5AP42229 794 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 MYBPC3Q14896 1274 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ALX1Q15699 326 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 DGUOKQ16854 277 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 PAGE2Q7Z2X7 111 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ATCAYQ86WG3 371 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CRELD1Q96HD1 420 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CPNE1Q99829 537 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CEP170Q5SW79 1584 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 UBE2QL1A1L167 161 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ERAL1O75616 437 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms