RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 TMEM135Q86UB9 458 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 TDRD5Q8NAT2 981 aaKnown RBP15.45■□□□□ 0.06
HDHD3-201ENST00000238379 RIN3Q8TB24 985 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 USP13Q92995 863 aaPredicted RBP15.45■□□□□ 0.06
HDHD3-201ENST00000238379 GDF15Q99988 308 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 FICDQ9BVA6 458 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 IL22Q9GZX6 179 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 VPS45Q9NRW7 570 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 SAMD15Q9P1V8 674 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 OR51B4Q9Y5P0 310 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 ACTL7AQ9Y615 435 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 E2F8A0AVK6 867 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 MAGEB16A2A368 324 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 TYW5A2RUC4 315 aaKnown RBP15.45■□□□□ 0.06
HDHD3-201ENST00000238379 CCDC85CA6NKD9 419 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 POLBP06746 335 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 TPH1P17752 444 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 CD86P42081 329 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 WNT3AP56704 352 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 NR1H3Q13133 447 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 DUSP6Q16828 381 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 ALG1LQ6GMV1 187 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 TRABD2AQ86V40 505 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 LRRC6Q86X45 466 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 TTC17Q96AE7 1141 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 PSKH2Q96QS6 385 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 CAPS2Q9BXY5 557 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 LMAN2LQ9H0V9 348 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 MUC3BQ9H195 1237 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 TLE6Q9H808 572 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 ACTL7BQ9Y614 415 aa15.45■□□□□ 0.06
HDHD3-201ENST00000238379 TTC24A2A3L6 582 aaPredicted RBP15.44■□□□□ 0.06
HDHD3-201ENST00000238379 CBX4O00257 560 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 ATP9BO43861 1147 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 SHOX2O60902 331 aaPredicted RBP15.44■□□□□ 0.06
HDHD3-201ENST00000238379 ZMPSTE24O75844 475 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 MZF1P28698 734 aaPredicted RBP15.44■□□□□ 0.06
HDHD3-201ENST00000238379 MDH1P40925 334 aaKnown RBP15.44■□□□□ 0.06
HDHD3-201ENST00000238379 GUCY1A3Q02108 690 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 ZNF235Q14590 738 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 MPPE1Q53F39 396 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 PPP2R2DQ66LE6 453 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 RNF43Q68DV7 783 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 POTEHQ6S545 545 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 CES3Q6UWW8 571 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 SRRM1Q8IYB3 904 aaKnown RBP15.44■□□□□ 0.06
HDHD3-201ENST00000238379 UNC5BQ8IZJ1 945 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 PPM1NQ8N819 430 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 MDM1Q8TC05 714 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 WFDC5Q8TCV5 224 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 DDI1Q8WTU0 396 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 MZB1Q8WU39 189 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 ALG14Q96F25 216 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 FCRL3Q96P31 734 aaPredicted RBP15.44■□□□□ 0.06
HDHD3-201ENST00000238379 FEM1AQ9BSK4 669 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 FSD1LQ9BXM9 530 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 POLR1EQ9GZS1 481 aaKnown RBP15.44■□□□□ 0.06
HDHD3-201ENST00000238379 CNOT10Q9H9A5 744 aaKnown RBP15.44■□□□□ 0.06
HDHD3-201ENST00000238379 ARNT2Q9HBZ2 717 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 TDP1Q9NUW8 608 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 UBA2Q9UBT2 640 aaPredicted RBP15.44■□□□□ 0.06
HDHD3-201ENST00000238379 MSRAQ9UJ68 235 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 RPS6KL1Q9Y6S9 549 aa15.44■□□□□ 0.06
HDHD3-201ENST00000238379 FAM237BA0A1B0GVD1 139 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 ZNF197O14709 1029 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 PAPLNO95428 1278 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 KRT15P19012 456 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 NRIP1P48552 1158 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 PPARDQ03181 441 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 CDH18Q13634 790 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 RFTN1Q14699 578 aaPredicted RBP15.43■□□□□ 0.06
HDHD3-201ENST00000238379 SPANXN3Q5MJ09 141 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 COL13A1Q5TAT6 717 aaPredicted RBP15.43■□□□□ 0.06
HDHD3-201ENST00000238379 TTC19Q6DKK2 380 aaPredicted RBP15.43■□□□□ 0.06
HDHD3-201ENST00000238379 ELMSAN1Q6PJG2 1045 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 SLC26A11Q86WA9 606 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 CCDC117Q8IWD4 279 aaPredicted RBP15.43■□□□□ 0.06
HDHD3-201ENST00000238379 CTAGE3PQ8IX95 158 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 GDPD5Q8WTR4 605 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 BHMTQ93088 406 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 ZSWIM3Q96MP5 696 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 SEMA3CQ99985 751 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 SELENOSQ9BQE4 189 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 MGME1Q9BQP7 344 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 SEPT3Q9UH03 358 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 HELZP42694 1942 aaKnown RBP15.43■□□□□ 0.06
HDHD3-201ENST00000238379 ATG2AQ2TAZ0 1938 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 ZCWPW2A0A1B0GU75 182 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 EPOPA6NHQ4 379 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 A6NNZ2 444 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 SNAP91O60641 907 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 UGT1A9O60656 530 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 GJB3O75712 270 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 USP1O94782 785 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 PRAMEF12O95522 483 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 CD160O95971 181 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 INHBAP08476 426 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 CHRNA4P43681 627 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 ARF5P84085 180 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 KCNC3Q14003 757 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms